RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 OR9A2Q8NGT5 310 aa17.52■□□□□ 0.4
HOXA9-201ENST00000343483 TREX2Q9BQ50 279 aaPredicted RBP17.52■□□□□ 0.4
HOXA9-201ENST00000343483 ROGDIQ9GZN7 287 aa17.52■□□□□ 0.4
HOXA9-201ENST00000343483 GPN2Q9H9Y4 310 aaPredicted RBP17.52■□□□□ 0.4
HOXA9-201ENST00000343483 PLGRKTQ9HBL7 147 aa17.52■□□□□ 0.4
HOXA9-201ENST00000343483 PSME2Q9UL46 239 aa17.52■□□□□ 0.4
HOXA9-201ENST00000343483 FAM32AQ9Y421 112 aaKnown RBP17.52■□□□□ 0.4
HOXA9-201ENST00000343483 ZNF99A8MXY4 864 aaPredicted RBP17.52■□□□□ 0.39
HOXA9-201ENST00000343483 B3GALT2O43825 422 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 DNAJB5O75953 348 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 PDE9AO76083 593 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 WNT1P04628 370 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 IFNW1P05000 195 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 HMGN2P05204 90 aaKnown RBP17.52■□□□□ 0.39
HOXA9-201ENST00000343483 NR2F1P10589 423 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF182P17025 639 aaPredicted RBP17.52■□□□□ 0.39
HOXA9-201ENST00000343483 CD27P26842 260 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 KHKP50053 298 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 RPP38P78345 283 aaKnown RBP17.52■□□□□ 0.39
HOXA9-201ENST00000343483 EMX1Q04741 257 aaPredicted RBP17.52■□□□□ 0.39
HOXA9-201ENST00000343483 FOXD4Q12950 439 aaPredicted RBP17.52■□□□□ 0.39
HOXA9-201ENST00000343483 LASP1Q14847 261 aaKnown RBP17.52■□□□□ 0.39
HOXA9-201ENST00000343483 ARMC6Q6NXE6 501 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 ABHD13Q7L211 337 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 GIPC3Q8TF64 312 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 RSC1A1Q92681 617 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 SERINC2Q96SA4 455 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 CSF3RQ99062 836 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 PIP5K1AQ99755 562 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 FUNDC2Q9BWH2 189 aa17.52■□□□□ 0.39
HOXA9-201ENST00000343483 OR5K3A6NET4 321 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF860A6NHJ4 632 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 MFN2O95140 757 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 FHP07954 510 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 CD38P28907 300 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 PPP2R1BP30154 601 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 MC3RP41968 323 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 XCR1P46094 333 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 GP2P55259 537 aaKnown RBP17.51■□□□□ 0.39
HOXA9-201ENST00000343483 OLR1P78380 273 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 TNFRSF17Q02223 184 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 BNIP3Q12983 259 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 GANABQ14697 944 aaKnown RBP17.51■□□□□ 0.39
HOXA9-201ENST00000343483 NPTX1Q15818 432 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 SIX5Q8N196 739 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 FAM174AQ8TBP5 190 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 TBC1D15Q8TC07 691 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 SFXN5Q8TD22 340 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 KLHL6Q8WZ60 621 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 PROX1Q92786 737 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF681Q96N22 645 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 COL21A1Q96P44 957 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF607Q96SK3 696 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 PITX2Q99697 317 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 MIR1-1HGQ9H1L0 117 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 DUSP21Q9H596 190 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 ANKRA2Q9H9E1 313 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 PHF11Q9UIL8 331 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 PCDHGB1Q9Y5G3 927 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 KLK4Q9Y5K2 254 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 PRAMEF27A3QJZ7 478 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 METTL12A8MUP2 240 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 FAM20BO75063 409 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 DNAJB6O75190 326 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 BCL10O95999 233 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 SMIM10L1P0DMW3 83 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF10P21506 573 aaPredicted RBP17.51■□□□□ 0.39
HOXA9-201ENST00000343483 LIM2P55344 173 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 MAZP56270 477 aaKnown RBP17.51■□□□□ 0.39
HOXA9-201ENST00000343483 SLC35A2P78381 396 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 PRR5P85299 388 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 KCNC4Q03721 635 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 RUNX2Q13950 521 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 LTB4RQ15722 352 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 EXOC3L2Q2M3D2 409 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 CCDC71Q8IV32 467 aaPredicted RBP17.51■□□□□ 0.39
HOXA9-201ENST00000343483 OR56A1Q8NGH5 318 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 FAR1Q8WVX9 515 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 FKBP10Q96AY3 582 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 SMIM10Q96HG1 83 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 FEVQ99581 238 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 GABARAPL3Q9BY60 117 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 EQTNQ9NQ60 294 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 RASSF1Q9NS23 344 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 SEC14L3Q9UDX4 400 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 MRPS2Q9Y399 296 aaKnown RBP17.51■□□□□ 0.39
HOXA9-201ENST00000343483 ENPP4Q9Y6X5 453 aa17.51■□□□□ 0.39
HOXA9-201ENST00000343483 FAM86C2PA6NEL3 165 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 RECKO95980 971 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 ALOX12P18054 663 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 ANXA11P50995 505 aaKnown RBP17.5■□□□□ 0.39
HOXA9-201ENST00000343483 SIM1P81133 766 aaPredicted RBP17.5■□□□□ 0.39
HOXA9-201ENST00000343483 RPL6Q02878 288 aaKnown RBP17.5■□□□□ 0.39
HOXA9-201ENST00000343483 PUM1Q14671 1186 aaKnown RBP eCLIP17.5■□□□□ 0.39
HOXA9-201ENST00000343483 SMN1Q16637 294 aaKnown RBP17.5■□□□□ 0.39
HOXA9-201ENST00000343483 OLIG3Q7RTU3 272 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 TMEFF1Q8IYR6 380 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 ZNF540Q8NDQ6 660 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 GPR32P1Q8NGA4 272 aa17.5■□□□□ 0.39
HOXA9-201ENST00000343483 OR10G2Q8NGC3 310 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms