RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 CSF2RAP15509 400 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 RPL7P18124 248 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 CNR1P21554 472 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SSTR2P30874 369 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PBX3P40426 434 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MRPL19P49406 292 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 HCCSP53701 268 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 DHCR24Q15392 516 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 DOK7Q18PE1 504 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PROSER3Q2NL68 480 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 KIAA1211LQ6NV74 962 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ENPP7Q6UWV6 458 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 FAM151BQ6UXP7 276 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ZNF551Q7Z340 670 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 TMPRSS12Q86WS5 348 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TMEM151AQ8N4L1 468 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SUMF1Q8NBK3 374 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 OR4D6Q8NGJ1 314 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 HAVCR2Q8TDQ0 301 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SORCS1Q8WY21 1168 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SGK3Q96BR1 496 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 RASD2Q96D21 266 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 THAP7Q9BT49 309 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 GCM1Q9NP62 436 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 USP36Q9P275 1121 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 SHPKQ9UHJ6 478 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 HEG1Q9ULI3 1381 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 IQSEC2Q5JU85 1478 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TRBV2A0A0J9YWF9 115 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 A0A1W2PPM1 405 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 DUXAA6NLW8 204 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 F8VP50 259 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 C8GP07360 202 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 GIFP27352 417 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ARL2P36404 184 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CXCR3P49682 368 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 AKR1C2P52895 323 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PCBP1Q15365 356 aaKnown RBP eCLIP5.92□□□□□ -1.46
VCAN-203ENST00000343200 FBXL19Q6PCT2 694 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MR1Q95460 341 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SLC41A2Q96JW4 573 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SPACA7Q96KW9 195 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MROQ9BYG7 248 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 FBRSQ9HAH7 460 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 KLHL21Q9UJP4 597 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 DKKL1Q9UK85 242 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TP53TG5Q9Y2B4 290 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MRPS23Q9Y3D9 190 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 PCDHB14Q9Y5E9 798 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PCDHB11Q9Y5F2 797 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 CD8B2A6NJW9 211 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 EEF1E1-BLOC1S5C9J1V9 151 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 KDELR3O43731 214 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CD8BP10966 210 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ADORA2AP29274 412 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ZNF154Q13106 437 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CYBRD1Q53TN4 286 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 H3F3CQ6NXT2 135 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 GRAMD2AQ8IUY3 354 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 BBS10Q8TAM1 723 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 HOXB13Q92826 284 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 WNT8BQ93098 351 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PIP5K1AQ99755 562 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SEC22CQ9BRL7 303 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SLC28A3Q9HAS3 691 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ABCC13Q9NSE7 274 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 SPG21Q9NZD8 308 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 COLEC10Q9Y6Z7 277 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 TRAF3IP2O43734 574 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 HBP1O60381 514 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CBR1P16152 277 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PTTG1IPP53801 180 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 FAM162BQ5T6X4 162 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CST9LP1Q5W188 147 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 WSCD1Q658N2 575 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 C17orf107Q6ZR85 190 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 ZBTB2Q8N680 514 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 RELL2Q8NC24 303 aaPredicted RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 ADAMTS16Q8TE57 1224 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MXRA8Q9BRK3 442 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 CPVLQ9H3G5 476 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 PATZ1Q9HBE1 687 aaKnown RBP5.92□□□□□ -1.46
VCAN-203ENST00000343200 FAM118AQ9NWS6 357 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 URGCP-MRPS24S4R325 110 aa5.92□□□□□ -1.46
VCAN-203ENST00000343200 MROH6A6NGR9 719 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 NDST3O95803 873 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 GOT2P00505 430 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 MT-ND4LP03901 98 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 AHCYP23526 432 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 TAS2R46P59540 309 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 CACNG1Q06432 222 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 METAP1DQ6UB28 335 aaPredicted RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 OR52E4Q8NGH9 312 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 KCNJ9Q92806 393 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 RBM18Q96H35 190 aaKnown RBP5.91□□□□□ -1.46
VCAN-203ENST00000343200 SERTAD4Q9NUC0 356 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 F5H6K3 240 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 SCDO00767 359 aa5.91□□□□□ -1.46
VCAN-203ENST00000343200 FANCGO15287 622 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms