RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 SLITRK3O94933 977 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 AMY2AP04746 511 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 PBX2P40425 430 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 GCNT2Q8N0V5 402 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 EEF1E1-BLOC1S5C9J1V9 151 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ECI2O75521 394 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 PNMTP11086 282 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 GAS6Q14393 721 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 SLAMF9Q96A28 289 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 TMPRSS5Q9H3S3 457 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ASB4Q9Y574 426 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 PSAT1Q9Y617 370 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 IQGAP1P46940 1657 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 CPED1A4D0V7 1026 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 CLDN5O00501 218 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 LGR5O75473 907 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ZNF783Q6ZMS7 281 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 TSTD1Q8NFU3 115 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ARNTL2Q8WYA1 636 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 QPCTLQ9NXS2 382 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 PLSCR5A0PG75 271 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 H0YAE9 185 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ENPP3O14638 875 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 TOX4O94842 621 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 APLNRP35414 380 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 SNTB1Q13884 538 aaKnown RBP16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ZNF679Q8IYX0 411 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 C12orf29Q8N999 325 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 CPNE6O95741 557 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ZNF74Q16587 644 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 ZNF630Q2M218 657 aaPredicted RBP16.91■□□□□ 0.3
SMAD4-201ENST00000342988 GPR33Q49SQ1 333 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 CNKSR3Q6P9H4 555 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 RFWD3Q6PCD5 774 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 DBX2Q6ZNG2 339 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 PTCHD1Q96NR3 888 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 TESQ9UGI8 421 aaKnown RBP16.91■□□□□ 0.3
SMAD4-201ENST00000342988 A0A1W2PPW3 197 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 WASH4PA8MWX3 477 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 SYN3O14994 580 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 TRNP1Q6NT89 227 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 FKBP10Q96AY3 582 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 HSPBAP1Q96EW2 488 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 SLC29A3Q9BZD2 475 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 FBRSQ9HAH7 460 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 J3QRK9 145 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 PRAF2O60831 178 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 FPR1P21462 350 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 RIOX1Q9H6W3 641 aa16.91■□□□□ 0.3
SMAD4-201ENST00000342988 USP32Q8NFA0 1604 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 B4DGG1 531 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 RAB28P51157 221 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SAMD7Q7Z3H4 446 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 TMEM151BQ8IW70 566 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 OR56B4Q8NH76 319 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 AMBNQ9NP70 447 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 FAAHO00519 579 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 TGFB1P01137 390 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 RBMXL3Q8N7X1 1067 aaKnown RBP16.9■□□□□ 0.3
SMAD4-201ENST00000342988 OR10Q1Q8NGQ4 319 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SGK3Q96BR1 496 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 ATF6BQ99941 703 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 MINDY3Q9H8M7 445 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SOBPA7XYQ1 873 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SDC3O75056 442 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 MED6O75586 246 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 RETP07949 1114 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 PTGER4P35408 488 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SOX10P56693 466 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 CAP1Q01518 475 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SLAMF1Q13291 335 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 DEDD2Q8WXF8 326 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SLC6A5Q9Y345 797 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 C11orf98E9PRG8 122 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 PTTG1O95997 202 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 MC3RP41968 323 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 DGKQP52824 942 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 CYBRD1Q53TN4 286 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 LRFN4Q6PJG9 635 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 OR8K5Q8NH50 307 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SMPDL3AQ92484 453 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 ABCG5Q9H222 651 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 ACP6Q9NPH0 428 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 PRAMEF2O60811 474 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 SBK2P0C263 348 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 ETV5P41161 510 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 GSK3AP49840 483 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 PPT1P50897 306 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 PRELID2Q8N945 189 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 OR4Q3Q8NH05 313 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 TAS2R16Q9NYV7 291 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 CLTCL1P53675 1640 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 UBE2Q2LH0YL09 131 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 UQCRC2P22695 453 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 DLX2Q07687 328 aaPredicted RBP16.9■□□□□ 0.3
SMAD4-201ENST00000342988 ZFAND1Q8TCF1 268 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 FAM212BQ9NTI7 297 aaPredicted RBP16.9■□□□□ 0.3
SMAD4-201ENST00000342988 DNAJB11Q9UBS4 358 aa16.9■□□□□ 0.3
SMAD4-201ENST00000342988 OAS1P00973 400 aaKnown RBP16.9■□□□□ 0.3
SMAD4-201ENST00000342988 PPP2CAP67775 309 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms