RNA–Protein interactions for RNA: ENST00000342494.7

UBE3B-202, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,722 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-202ENST00000342494 OGFRL1Q5TC84 451 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ARHGAP11AQ6P4F7 1023 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 TMEM135Q86UB9 458 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 RBM12BQ8IXT5 1001 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 CASD1Q96PB1 797 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SERINC2Q96SA4 455 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 RDH8Q9NYR8 311 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ACSL6Q9UKU0 697 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ALDOAP04075 364 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 KDELR2P33947 212 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 TM4SF4P48230 202 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 MAN2A2P49641 1150 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 HK3P52790 923 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 NDUFAF5Q5TEU4 345 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 TAMM41Q96BW9 452 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 NECAB3Q96P71 396 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 SECISBP2Q96T21 854 aaKnown RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 ALOXE3Q9BYJ1 711 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 KCNIP3Q9Y2W7 256 aa14.3□□□□□ -0.12
UBE3B-202ENST00000342494 HEMK1Q9Y5R4 338 aaPredicted RBP14.3□□□□□ -0.12
UBE3B-202ENST00000342494 GIMAP1-GIMAP5A0A087WTJ2 511 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 MBLAC1A4D2B0 266 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-202ENST00000342494 ATAD3CQ5T2N8 411 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 ARSKQ6UWY0 536 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 UEVLDQ8IX04 471 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 ENAMQ9NRM1 1142 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 DNAJC25-GNG10A0A024R161 153 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 OR52A4PA6NMU1 304 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 GRPRP30550 384 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 TUBA3EQ6PEY2 450 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 RLN3Q8WXF3 142 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 FBXL20Q96IG2 436 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 AIG1Q9NVV5 245 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 SCGB2A1O75556 95 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 IER5LQ5T953 404 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 OR8H3Q8N146 312 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 GALNT11Q8NCW6 608 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 OR52B6Q8NGF0 335 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 DPH2Q9BQC3 489 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-202ENST00000342494 UCKL1Q9NWZ5 548 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 STOX2Q9P2F5 926 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-202ENST00000342494 SRPK3Q9UPE1 567 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 A0A0J9YY10 115 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 NPIPB15A6NHN6 443 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-202ENST00000342494 EIF3FO00303 357 aaPredicted RBP14.29□□□□□ -0.12
UBE3B-202ENST00000342494 FMO6PO60774 539 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 APOL3O95236 402 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 PROZP22891 400 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 GSTM2P28161 218 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 POU4F2Q12837 409 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.29□□□□□ -0.12
UBE3B-202ENST00000342494 C16orf78Q8WTQ4 265 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 ICKQ9UPZ9 632 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 ADAM18Q9Y3Q7 739 aa14.29□□□□□ -0.12
UBE3B-202ENST00000342494 TRIM64BA6NI03 449 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 NDUFV2P19404 249 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 FRKP42685 505 aaPredicted RBP14.28□□□□□ -0.12
UBE3B-202ENST00000342494 OR4D1Q15615 310 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 OR13C3Q8NGS6 347 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 SLC12A9Q9BXP2 914 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF442Q9H7R0 627 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 CMAHPQ9Y471 501 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 PTGDR2Q9Y5Y4 395 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 PABPC4LP0CB38 370 aaKnown RBP14.28□□□□□ -0.12
UBE3B-202ENST00000342494 ATG5Q9H1Y0 275 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 NUP50Q9UKX7 468 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 MON2Q7Z3U7 1717 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 KIR2DS5A0A0G2JLQ3 304 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 A0A0G2JNG1 304 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 KIR2DS3K7RE56 304 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 RHCEP18577 417 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 CD6P30203 668 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 KIR2DS5Q14953 304 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 TRAM1Q15629 374 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 C15orf39Q6ZRI6 1047 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 DCP2Q8IU60 420 aaKnown RBP14.28□□□□□ -0.12
UBE3B-202ENST00000342494 ZNF584Q8IVC4 421 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 WDR20Q8TBZ3 569 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 NAT6Q93015 286 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 LRRN3E7EW58 273 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 LHCGRP22888 699 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 PYCR1P32322 319 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 SFTPDP35247 375 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 TPTEP56180 551 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 CLDN8P56748 225 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 TUBB3Q13509 450 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 COMMD6Q7Z4G1 85 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 POGLUT1Q8NBL1 392 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 ACTRT3Q9BYD9 372 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 DNTTIP1Q9H147 329 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 LRRN3Q9H3W5 708 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 HEBP1Q9NRV9 189 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 C2orf42Q9NWW7 574 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 ACTL7AQ9Y615 435 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 SLC22A31A6NKX4 558 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 GPR4P46093 362 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 GJA8P48165 433 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 ADAM17P78536 824 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 PM20D1Q6GTS8 502 aa14.28□□□□□ -0.12
UBE3B-202ENST00000342494 SCD5Q86SK9 330 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms