RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 SCARB2Q14108 478 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 GUK1Q16774 197 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SLC30A10Q6XR72 485 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF574Q6ZN55 896 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PPP1R3FQ6ZSY5 799 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 RFPL4BQ6ZWI9 263 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 RETREG3Q86VR2 466 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SAMD12Q8N8I0 201 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF461Q8TAF7 563 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CCDC115Q96NT0 180 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 LENG8Q96PV6 779 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 GPER1Q99527 375 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 NANOGQ9H9S0 305 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 EPHA6Q9UF33 1036 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 NAALAD2Q9Y3Q0 740 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PCDHGA5Q9Y5G8 931 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 BHLHE40O14503 412 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PIP5K1BO14986 540 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TBX1O43435 398 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 BRINP1O60477 761 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ADAMTS4O75173 837 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TOXO94900 526 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SPDEFO95238 335 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PTHP01270 115 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 POU2F2P09086 479 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 MMP7P09237 267 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 C1GALT1C1LP0DN25 315 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SLC2A2P11168 524 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 AOC1P19801 751 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 FPR1P21462 350 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CD38P28907 300 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 UBE2NP61088 152 aaKnown RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 GABREP78334 506 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 NPRL3Q12980 569 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 RAB39AQ14964 217 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CWF19L1Q69YN2 538 aaKnown RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TANGO2Q6ICL3 276 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 SLC8B1Q6J4K2 584 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 FAM198BQ6UWH4 519 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 GFRALQ6UXV0 394 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 ASRGL1Q7L266 308 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TSPYL5Q86VY4 417 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 CARM1Q86X55 608 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 MAP4K3Q8IVH8 894 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 RNF25Q96BH1 459 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 PTERQ96BW5 349 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 REV1Q9UBZ9 1251 aa3.15□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM184BQ9Y519 407 aaPredicted RBP3.15□□□□□ -1.91
CSMD3-202ENST00000339701 IGKV6D-41A0A0C4DH26 115 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PRAMEF33A0A0G2JMD5 474 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PCP4L1A6NKN8 68 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KIAA0513O60268 411 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PRAMEF10O60809 474 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 HLA-HP01893 362 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RPS5P46782 204 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DLX5P56178 289 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FGD3Q5JSP0 725 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLX4IPQ5VYV7 408 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 SLC6A19Q695T7 634 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GPAT2Q6NUI2 795 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 KCTD9Q7L273 389 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PLA2G15Q8NCC3 412 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ST7LQ8TDW4 575 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FIG4Q92562 907 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 GGHQ92820 318 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 FCRL3Q96P31 734 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ACTL8Q9H568 366 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 DYNLRB1Q9NP97 96 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CHST11Q9NPF2 352 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR5K3A6NET4 321 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 A8MVM7 634 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 JRKO75564 520 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RFPL1O75677 317 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 UBOX5O94941 541 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 LCKP06239 509 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 IFI30P13284 250 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PGAM2P15259 253 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 POU3F3P20264 500 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NFYAP23511 347 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RBMXP38159 391 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 EPHA5P54756 1037 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 NKX3-2P78367 333 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 LIPEQ05469 1076 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 IL18Q14116 193 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF266Q14584 549 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 USF2Q15853 346 aaPredicted RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PLA1AQ53H76 456 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM201Q5SNT2 666 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TRMT10BQ6PF06 316 aaKnown RBP3.14□□□□□ -1.91
CSMD3-202ENST00000339701 MBOAT1Q6ZNC8 495 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 PTCHD4Q6ZW05 846 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TRIM46Q7Z4K8 759 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 CNTN4Q8IWV2 1026 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 RASGEF1CQ8N431 466 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 TOMM5Q8N4H5 51 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR4K17Q8NGC6 315 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 OR8H1Q8NGG4 311 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ANAPC16Q96DE5 110 aa3.14□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF285Q96NJ3 590 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms