RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 TMEM236Q5W0B7 351 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 DGAT2L6Q6ZPD8 337 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 C8orf59Q8N0T1 100 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 DEFB123Q8N688 67 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CSNK1A1LQ8N752 337 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 TTC29Q8NA56 475 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 SRFBP1Q8NEF9 429 aaKnown RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 NUP43Q8NFH3 380 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 BPIFB6Q8NFQ5 453 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 NT5CQ8TCD5 201 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 GTPBP3Q969Y2 492 aaKnown RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 GIMAP5Q96F15 307 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 MSANTD3Q96H12 275 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC35G5Q96KT7 338 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 NAA50Q9GZZ1 169 aaKnown RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 AMBNQ9NP70 447 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 A4GALTQ9NPC4 353 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 FSCN3Q9NQT6 498 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 KRT84Q9NSB2 600 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 ENTPD4Q9Y227 616 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 ANGPT4Q9Y264 503 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 PCDHGB3Q9Y5G1 929 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CEPT1Q9Y6K0 416 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CACNA1EQ15878 2313 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CENPVL1A0A0U1RR11 272 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 RDH16O75452 317 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 NME1P15531 152 aaKnown RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 PTNP21246 168 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CDH3P22223 829 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 ALDH3B2P48448 385 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 TPD52P55327 224 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 RPP38P78345 283 aaKnown RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 MAT1AQ00266 395 aaKnown RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 IL5RAQ01344 420 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CHRNEQ04844 493 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 C6orf141Q5SZD1 244 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CCNJQ5T5M9 372 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF691Q5VV52 312 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 DEF8Q6ZN54 512 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF555Q8NEP9 628 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 OR4C15Q8NGM1 316 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 LZICQ8WZA0 190 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 RERGQ96A58 199 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 NMNAT1Q9HAN9 279 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 C8orf4Q9NR00 106 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 FBXO34Q9NWN3 711 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 WNT16Q9UBV4 365 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CDC14AQ9UNH5 594 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 DOLKQ9UPQ8 538 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 GPR55Q9Y2T6 319 aaPredicted RBP6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 CHST2Q9Y4C5 530 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 PCDHGA2Q9Y5H1 932 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC22A7Q9Y694 548 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 ZNF780BQ9Y6R6 833 aa6.95□□□□□ -1.3
SRFBP1-201ENST00000339397 A0A0A6YYC8 382 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 IGHV5-51A0A0C4DH38 117 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 I3L1I5 382 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CYR61O00622 381 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC16A6O15403 523 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PRKNO60260 465 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PCDHGA12O60330 932 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GASTP01350 101 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CT62P0C5K7 136 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 BLKP51451 505 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ARHGDIAP52565 204 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 RACK1P63244 317 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TNFRSF17Q02223 184 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 NPRL3Q12980 569 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CDK5R2Q13319 367 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SUZ12Q15022 739 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 KCTD21Q4G0X4 260 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GPAT3Q53EU6 434 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TTC23Q5W5X9 447 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 FAHD1Q6P587 224 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ZC3H14Q6PJT7 736 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 KCTD8Q6ZWB6 473 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 VRK2Q86Y07 508 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ARMC8Q8IUR7 673 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SLC35A4Q96G79 324 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 OR7D2Q96RA2 312 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 NPLQ9BXD5 320 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 FAM192AQ9GZU8 254 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CAPN10Q9HC96 672 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 KIF17Q9P2E2 1029 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 SEC14L3Q9UDX4 400 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MUTYHQ9UIF7 546 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 POMT2Q9UKY4 750 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 MKLN1Q9UL63 735 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 NTNG1Q9Y2I2 539 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TMEM184BQ9Y519 407 aaPredicted RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 GPR179Q6PRD1 2367 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 ASCC3Q8N3C0 2202 aaKnown RBP6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 TTC28Q96AY4 2481 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 OR5K4A6NMS3 321 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 K7ESF4 209 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 HRKO00198 91 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 B3GALT2O43825 422 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 PEX14O75381 377 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 JRKO75564 520 aa6.94□□□□□ -1.3
SRFBP1-201ENST00000339397 CDH2P19022 906 aaPredicted RBP6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms