RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 NAGAP17050 411 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 KRT15P19012 456 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 CSNK2A2P19784 350 aaPredicted RBP16.32■□□□□ 0.2
CMTM1-204ENST00000336328 HSD17B3P37058 310 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 CLCQ05315 142 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 RPS6KA2Q15349 733 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 PRAMEF20Q5VT98 475 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 ADGRD1Q6QNK2 874 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 PACS2Q86VP3 889 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 LRRC25Q8N386 305 aaPredicted RBP16.32■□□□□ 0.2
CMTM1-204ENST00000336328 ZNF615Q8N8J6 731 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 OR10G3Q8NGC4 313 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 UHMK1Q8TAS1 419 aaKnown RBP16.32■□□□□ 0.2
CMTM1-204ENST00000336328 DOK4Q8TEW6 326 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 JSRP1Q96MG2 331 aaPredicted RBP16.32■□□□□ 0.2
CMTM1-204ENST00000336328 TREX2Q9BQ50 279 aaPredicted RBP16.32■□□□□ 0.2
CMTM1-204ENST00000336328 MCCC2Q9HCC0 563 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 TEX10Q9NXF1 929 aaPredicted RBP16.32■□□□□ 0.2
CMTM1-204ENST00000336328 ALKBH4Q9NXW9 302 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 VPS29Q9UBQ0 182 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 CNOT11Q9UKZ1 510 aaKnown RBP16.32■□□□□ 0.2
CMTM1-204ENST00000336328 NFU1Q9UMS0 254 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 ZNF780BQ9Y6R6 833 aa16.32■□□□□ 0.2
CMTM1-204ENST00000336328 A8MT66 165 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 SUPT7LO94864 414 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 PDYNP01213 254 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 ECHS1P30084 290 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 SSTR4P31391 388 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 CDH13P55290 713 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 MAP4K2Q12851 820 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 RASA2Q15283 850 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 UBAP2Q5T6F2 1119 aaKnown RBP16.31■□□□□ 0.2
CMTM1-204ENST00000336328 C1orf185Q5T7R7 199 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 SLC48A1Q6P1K1 146 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 COMMD6Q7Z4G1 85 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 SLC22A9Q8IVM8 553 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 SAMD14Q8IZD0 417 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-204ENST00000336328 ZNF441Q8N8Z8 693 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 UCN3Q969E3 161 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 ZNF597Q96LX8 424 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 ZNF703Q9H7S9 590 aaPredicted RBP16.31■□□□□ 0.2
CMTM1-204ENST00000336328 LIPGQ9Y5X9 500 aa16.31■□□□□ 0.2
CMTM1-204ENST00000336328 FREM3P0C091 2139 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 FAM90A27PA6NNH2 459 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 AHRRA9YTQ3 701 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 ULK1O75385 1050 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 ERAL1O75616 437 aaKnown RBP16.3■□□□□ 0.2
CMTM1-204ENST00000336328 TOXO94900 526 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 GLI4P10075 376 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 IMPDH1P20839 514 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 MASP1P48740 699 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 DCAF7P61962 342 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 TLE4Q04727 773 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 CCDC71Q8IV32 467 aaPredicted RBP16.3■□□□□ 0.2
CMTM1-204ENST00000336328 TMEM151AQ8N4L1 468 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 GBP7Q8N8V2 638 aaPredicted RBP16.3■□□□□ 0.2
CMTM1-204ENST00000336328 NEIL3Q8TAT5 605 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 SPPL2AQ8TCT8 520 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 ACMSDQ8TDX5 336 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 ADIPOR1Q96A54 375 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 TM4SF18Q96CE8 201 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 HSPBAP1Q96EW2 488 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 ANGPTL4Q9BY76 406 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 UCK2Q9BZX2 261 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 PROK2Q9HC23 129 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 FETUBQ9UGM5 382 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 DCDC2Q9UHG0 476 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 CES1P1Q9UKY3 287 aa16.3■□□□□ 0.2
CMTM1-204ENST00000336328 HCFC1P51610 2035 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 TRIM3O75382 744 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-204ENST00000336328 BCAS2O75934 225 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-204ENST00000336328 OR4F21O95013 312 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 CLPSP04118 112 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 ATP1B1P05026 303 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 GSTA1P08263 222 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 CELA3AP09093 270 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 RFPL3SP0C7P2 107 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 DRD2P14416 443 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 ATP5F1P24539 256 aaPredicted RBP16.29■□□□□ 0.2
CMTM1-204ENST00000336328 GDF1P27539 372 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 HMOX2P30519 316 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 NAA20P61599 178 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 CSTF3Q12996 717 aaKnown RBP16.29■□□□□ 0.2
CMTM1-204ENST00000336328 SLC25A35Q3KQZ1 300 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 CES4AQ5XG92 561 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 LETMD1Q6P1Q0 360 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 NUP54Q7Z3B4 507 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 VWA5B2Q8N398 1253 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 RPRMLQ8N4K4 120 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 METTL6Q8TCB7 284 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 CCDC126Q96EE4 140 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 DTNBP1Q96EV8 351 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 LRRC46Q96FV0 321 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 ZNF382Q96SR6 550 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 BRINP2Q9C0B6 783 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 FARSBQ9NSD9 589 aaKnown RBP16.29■□□□□ 0.2
CMTM1-204ENST00000336328 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 BCAP29Q9UHQ4 241 aa16.29■□□□□ 0.2
CMTM1-204ENST00000336328 NKX2-6A6NCS4 301 aa16.28■□□□□ 0.2
CMTM1-204ENST00000336328 HSPB2A8KAH6 182 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms