RNA–Protein interactions for RNA: ENST00000334414.10

PTPRB-202, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPRB, Length 12,316 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-202ENST00000334414 PHYHIPQ92561 330 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 SGTBQ96EQ0 304 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MCOLN1Q9GZU1 580 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MFFQ9GZY8 342 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 C1orf123Q9NWV4 160 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 FAM96BQ9Y3D0 163 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 C1RP00736 705 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 CSF2P04141 144 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PROS1P07225 676 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MPC1LP0DKB6 136 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 RAB5AP20339 215 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MAGEB1P43366 347 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 SUOXP51687 545 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 BTG1P62324 171 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 H3F3AP84243 136 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TATDN3Q17R31 274 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 CARD16Q5EG05 197 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TM9SF4Q92544 642 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 SORCS2Q96PQ0 1159 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 RBCK1Q9BYM8 510 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 DNAJC5Q9H3Z4 198 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 BRF2Q9HAW0 419 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 DNAJC27Q9NZQ0 273 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MAFFQ9ULX9 164 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 A0A0G2JLW4 131 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 GJE1A6NN92 205 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 FADS1O60427 444 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 LILRB5O75023 590 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 UPP2O95045 317 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TGFB1P01137 390 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PTPRAP18433 802 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 NDUFV2P19404 249 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 OPRL1P41146 370 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 RAB1AP62820 205 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PLA2G7Q13093 441 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 VEZF1Q14119 521 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 BATFQ16520 125 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PCGF3Q3KNV8 242 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 SLX4IPQ5VYV7 408 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 KIAA1211LQ6NV74 962 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TMPRSS12Q86WS5 348 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 CYP4X1Q8N118 509 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 ACBD7Q8N6N7 88 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 NDNFQ8TB73 568 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TTPALQ9BTX7 342 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 SEMA4CQ9C0C4 833 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 LYRM2Q9NU23 88 aaPredicted RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 AIG1Q9NVV5 245 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 IL20Q9NYY1 176 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 A0A0G2JN53 185 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TAAR5O14804 337 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 OSMP13725 252 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 RAC2P15153 192 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PAX6P26367 422 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PRKAR1BP31321 381 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 CNN3Q15417 329 aaKnown RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MSMO1Q15800 293 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 DUSP6Q16828 381 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 CNIH2Q6PI25 160 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 CLEC10AQ8IUN9 316 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 RBP7Q96R05 134 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 ERVK-18Q9QC07 812 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 A0A1W2PQH9 124 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 SCAMP2O15127 329 aaKnown RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 AHCYP23526 432 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 ARHGAP19Q14CB8 494 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PAFAH1B3Q15102 231 aaKnown RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 HBMQ6B0K9 141 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 ERN2Q76MJ5 926 aaKnown RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 IRF2BP1Q8IU81 584 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 FAM83FQ8NEG4 500 aaPredicted RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 THEM6Q8WUY1 208 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 NUS1Q96E22 293 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MFSD3Q96ES6 412 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TSSK2Q96PF2 358 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 POLDIP3Q9BY77 421 aaKnown RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 OR11A1Q9GZK7 315 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 OR51B5Q9H339 312 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 NDUFS4O43181 175 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 VEGFDO43915 354 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MAOBP27338 520 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 RBM39Q14498 530 aaKnown RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF266Q14584 549 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PLAG1Q6DJT9 500 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 DPPA2Q7Z7J5 298 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 SERPINA11Q86U17 422 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 OR51G2Q8NGK0 314 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 GLYATL2Q8WU03 294 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 NT5C3BQ969T7 300 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 HMCESQ96FZ2 354 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 RNF170Q96K19 258 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 PGLYRP2Q96PD5 576 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TSGA13Q96PP4 275 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 MYADMQ96S97 322 aa5.29□□□□□ -1.56
PTPRB-202ENST00000334414 HMX1Q9NP08 348 aaPredicted RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 ZFR2Q9UPR6 939 aaKnown RBP5.29□□□□□ -1.56
PTPRB-202ENST00000334414 TBC1D3BA6NDS4 549 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 ZNF705GA8MUZ8 300 aaPredicted RBP5.28□□□□□ -1.56
PTPRB-202ENST00000334414 AP1G1O43747 822 aa5.28□□□□□ -1.56
PTPRB-202ENST00000334414 AMY2AP04746 511 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms