RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 ACAD8Q9UKU7 415 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 SAGE2PA6NJ88 616 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 ERAL1O75616 437 aaKnown RBP12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 FGBP02675 491 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 ACP5P13686 325 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 TNFSF8P32971 234 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 CRYBB2P43320 205 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 FUT5Q11128 374 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 SPHARQ15513 63 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 KCNJ8Q15842 424 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 OR4C11Q6IEV9 310 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 C11orf74Q86VG3 221 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 SLC30A8Q8IWU4 369 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 CREB3L4Q8TEY5 395 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 C16orf58Q96GQ5 468 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 ABHD8Q96I13 439 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 PPP1R16AQ96I34 528 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 ASPNQ9BXN1 380 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 ZCCHC3Q9NUD5 404 aaKnown RBP12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 MGAT4BQ9UQ53 548 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 CARD8Q9Y2G2 431 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 KLHL20Q9Y2M5 609 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 PEX16Q9Y5Y5 336 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
TUBA1B-201ENST00000332858 F5P12259 2224 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 PNMA8CA0A1B0GUJ8 204 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 FRS3O43559 492 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 PCDH8O95206 1070 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 PAK4O96013 591 aaPredicted RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 CHRM4P08173 479 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 NR2F1P10589 423 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 GPC1P35052 558 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 ATAD3BQ5T9A4 648 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 LIPKQ5VXJ0 399 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 CASP12Q6UXS9 341 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 ADAMTSL4Q6UY14 1074 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 KLHL6Q8WZ60 621 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 TMEM80Q96HE8 168 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 TRNT1Q96Q11 434 aaKnown RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 FERD3LQ96RJ6 166 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 PLA2G12AQ9BZM1 189 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 C11orf49Q9H6J7 331 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 NDOR1Q9UHB4 597 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 ENOPH1Q9UHY7 261 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 KCNK6Q9Y257 313 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 GPC6Q9Y625 555 aaPredicted RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 LRIT2A6NDA9 550 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 OR52A4PA6NMU1 304 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 AGRPO00253 132 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 FAAHO00519 579 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 SNPHO15079 494 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 MED26O95402 600 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 HNRNPA1P09651 372 aaKnown RBP eCLIP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 CSTF2P33240 577 aaKnown RBP eCLIP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 MXD1Q05195 221 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 RPA4Q13156 261 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 TCEA2Q15560 299 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 ADGRD2Q7Z7M1 963 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 IQCHQ86VS3 1027 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 OR2A1Q8NGT9 310 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 OR8K5Q8NH50 307 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 SUSD6Q92537 303 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 SMG7Q92540 1137 aaKnown RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 TMEM203Q969S6 136 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 C12orf66Q96MD2 445 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 DDX31Q9H8H2 851 aaKnown RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 SNTG1Q9NSN8 517 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 IMP3Q9NV31 184 aaKnown RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 FBXL12Q9NXK8 326 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 MUTYHQ9UIF7 546 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 KNL1Q8NG31 2342 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 MUC22E2RYF6 1773 aaPredicted RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 SCN2AQ99250 2005 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 A0A0A6YYD5 115 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 PRR23AA6NEV1 266 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 MID1O15344 667 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 TBX19O60806 448 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 PIPP12273 146 aaPredicted RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 CXCR2P25025 360 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 SSR2P43308 183 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 NCBP2P52298 156 aaKnown RBP eCLIP12.67□□□□□ -0.385e-31■■□□□ 13.4
TUBA1B-201ENST00000332858 LASP1Q14847 261 aaKnown RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 ARHGAP19Q14CB8 494 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 SPANXN2Q5MJ10 180 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 FAM46CQ5VWP2 391 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 CCDC116Q8IYX3 515 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 OR4K5Q8NGD3 323 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 JPH3Q8WXH2 748 aaPredicted RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 ZNF607Q96SK3 696 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 POLR2J2Q9GZM3 115 aaKnown RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 YARS2Q9Y2Z4 477 aaKnown RBP12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 ATG4BQ9Y4P1 393 aa12.67□□□□□ -0.38
TUBA1B-201ENST00000332858 PLD2O14939 933 aa12.66□□□□□ -0.38
TUBA1B-201ENST00000332858 RGS5O15539 181 aa12.66□□□□□ -0.38
TUBA1B-201ENST00000332858 UGT2B17O75795 530 aa12.66□□□□□ -0.38
TUBA1B-201ENST00000332858 SLC35G4P0C7Q5 338 aa12.66□□□□□ -0.38
TUBA1B-201ENST00000332858 SOX6P35712 828 aa12.66□□□□□ -0.38
TUBA1B-201ENST00000332858 SNRPNP63162 240 aaKnown RBP12.66□□□□□ -0.38
TUBA1B-201ENST00000332858 FGL2Q14314 439 aa12.66□□□□□ -0.38
TUBA1B-201ENST00000332858 GINS1Q14691 196 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms