RNA–Protein interactions for RNA: ENST00000330852.9

RAB28-202, Transcript of RAB28, member RAS oncogene family, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RAB28, Length 1,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB28-202ENST00000330852 PCDHA9Q9Y5H5 950 aa16.66■□□□□ 0.26
RAB28-202ENST00000330852 CDH16O75309 829 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 SNX4O95219 450 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 CPMP14384 443 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 TAC1P20366 129 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 SSTR4P31391 388 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 TRA2BP62995 288 aaKnown RBP16.65■□□□□ 0.26
RAB28-202ENST00000330852 TFF3Q07654 80 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 RPS6KA2Q15349 733 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 TMEM198Q66K66 360 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 RPRMLQ8N4K4 120 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 TMEM151AQ8N4L1 468 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 ZNF615Q8N8J6 731 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 SELENOMQ8WWX9 145 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 DOHHQ9BU89 302 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 OR10A5Q9H207 317 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 SLC12A4Q9UP95 1085 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 NPFFR2Q9Y5X5 522 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 EXOC1LA0A1B0GW35 172 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 A8MT66 165 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 CELA3AP09093 270 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 GLI4P10075 376 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 HSD3B1P14060 373 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 NAGAP17050 411 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 HSD3B2P26439 372 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 MSX1P28360 303 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 ZFP36L2P47974 494 aaKnown RBP16.65■□□□□ 0.26
RAB28-202ENST00000330852 TLE4Q04727 773 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 PRAMEF20Q5VT98 475 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 SLC48A1Q6P1K1 146 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 TRMT10CQ7L0Y3 403 aaKnown RBP16.65■□□□□ 0.26
RAB28-202ENST00000330852 COMMD6Q7Z4G1 85 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 OR10Q1Q8NGQ4 319 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 DOK4Q8TEW6 326 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 UCN3Q969E3 161 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 ADIPOR1Q96A54 375 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 ZNF597Q96LX8 424 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 FAM215AQ9Y5M1 114 aa16.65■□□□□ 0.26
RAB28-202ENST00000330852 TACC2O95359 2948 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 LRRC3CA6NJW4 275 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 TRIM3O75382 744 aaPredicted RBP16.64■□□□□ 0.25
RAB28-202ENST00000330852 NT5EP21589 574 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 MAP4K2Q12851 820 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 C1orf185Q5T7R7 199 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 LETMD1Q6P1Q0 360 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 CCDC71Q8IV32 467 aaPredicted RBP16.64■□□□□ 0.25
RAB28-202ENST00000330852 CLYBLQ8N0X4 340 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 NEIL3Q8TAT5 605 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 DIO2Q92813 273 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 FAIM2Q9BWQ8 316 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 CES1P1Q9UKY3 287 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 STK38LQ9Y2H1 464 aa16.64■□□□□ 0.25
RAB28-202ENST00000330852 OTOGQ6ZRI0 2925 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 FAM90A27PA6NNH2 459 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 PDYNP01213 254 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 KRT6AP02538 564 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 KRT6BP04259 564 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 ATP1B1P05026 303 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 SBK3P0C264 359 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 RFPL3SP0C7P2 107 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 CSNK2A2P19784 350 aaPredicted RBP16.63■□□□□ 0.25
RAB28-202ENST00000330852 HSD17B3P37058 310 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 KRT6CP48668 564 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 CLCQ05315 142 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 RASA2Q15283 850 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 SGO1Q5FBB7 561 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 RTL6Q6ICC9 239 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 DMRTC2Q8IXT2 367 aaPredicted RBP16.63■□□□□ 0.25
RAB28-202ENST00000330852 LIX1Q8N485 282 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 SPPL2AQ8TCT8 520 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 ANGPTL4Q9BY76 406 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 UCK2Q9BZX2 261 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 NPDC1Q9NQX5 325 aaPredicted RBP16.63■□□□□ 0.25
RAB28-202ENST00000330852 VPS29Q9UBQ0 182 aa16.63■□□□□ 0.25
RAB28-202ENST00000330852 ANKRD17O75179 2603 aaKnown RBP16.63■□□□□ 0.25
RAB28-202ENST00000330852 NKX2-6A6NCS4 301 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 CT62P0C5K7 136 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 CDH13P55290 713 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 GALNT1Q10472 559 aaPredicted RBP16.62■□□□□ 0.25
RAB28-202ENST00000330852 SF3B4Q15427 424 aaKnown RBP eCLIP16.62■□□□□ 0.25
RAB28-202ENST00000330852 SLC25A35Q3KQZ1 300 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 RIPPLY2Q5TAB7 128 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 PACS2Q86VP3 889 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 IFT20Q8IY31 132 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 VWA5B2Q8N398 1253 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 ZNF382Q96SR6 550 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 FARSBQ9NSD9 589 aaKnown RBP16.62■□□□□ 0.25
RAB28-202ENST00000330852 SPRR3Q9UBC9 169 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 KCNN3Q9UGI6 736 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 FETUBQ9UGM5 382 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 CSMD1Q96PZ7 3565 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 CCDC168Q8NDH2 2452 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 AHRRA9YTQ3 701 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 KRT15P19012 456 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 ENDOUP21128 410 aaKnown RBP16.62■□□□□ 0.25
RAB28-202ENST00000330852 S1PR1P21453 382 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 CSTF3Q12996 717 aaKnown RBP16.62■□□□□ 0.25
RAB28-202ENST00000330852 PRICKLE4Q2TBC4 344 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
RAB28-202ENST00000330852 TMEM81Q6P7N7 255 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms