RNA–Protein interactions for RNA: ENST00000330394.2

EPHB3-201, Transcript of EPH receptor B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EPHB3, Length 4,236 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-201ENST00000330394 DNAJA3Q96EY1 480 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 SAP130Q9H0E3 1048 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 NTN4Q9HB63 628 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 CKLFQ9UBR5 152 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 TCRBV5S2A0A599 114 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 OR6C74A6NCV1 312 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 WASHC1A8K0Z3 465 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 FABP7O15540 132 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 NDUFS4O43181 175 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 MRPS14O60783 128 aaKnown RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 AHCYP23526 432 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 GIFP27352 417 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 HOXD11P31277 338 aaPredicted RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 ARFIP1P53367 373 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 HBA1P69905 142 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 PXDC1Q5TGL8 231 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 CYB561A3Q8NBI2 242 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 POGLUT1Q8NBL1 392 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 OR52P1PQ8NH57 321 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 DUS3LQ96G46 650 aaKnown RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF419Q96HQ0 510 aaPredicted RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 ZC3H10Q96K80 434 aaKnown RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 HRASLS5Q96KN8 279 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 SPACA7Q96KW9 195 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 DUSP21Q9H596 190 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 OR6C2Q9NZP2 312 aa13.38□□□□□ -0.27
EPHB3-201ENST00000330394 FARSAQ9Y285 508 aaKnown RBP13.38□□□□□ -0.27
EPHB3-201ENST00000330394 C13orf42A0A1B0GVH6 325 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 URADA6NGE7 173 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SLC25A12O75746 678 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 CBLP22681 906 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 MASP1P48740 699 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TGM4P49221 684 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 FAPQ12884 760 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SLC8B1Q6J4K2 584 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SERPINA12Q8IW75 414 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SYT14Q8NB59 555 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 KLHDC9Q8NEP7 349 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 OR9A1PQ8NGU1 263 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 LKAAEAR1Q8TD35 194 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 PPP1R14AQ96A00 147 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 XKR8Q9H6D3 395 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 RLIMQ9NVW2 624 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SLC27A6Q9Y2P4 619 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 DDX60LQ5H9U9 1706 aaKnown RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 DISC1C4P0D8 188 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 KCNK5O95279 499 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 ALDOBP05062 364 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF8P17098 575 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 DDX6P26196 483 aaKnown RBP eCLIP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 BMP8BP34820 402 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 EIF2B5Q13144 721 aaKnown RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 RAB41Q5JT25 222 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 PLEKHS1Q5SXH7 462 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 XAF1Q6GPH4 301 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 HAGHLQ6PII5 290 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 BMP8AQ7Z5Y6 402 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 LINC00471Q8N535 108 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 GPR26Q8NDV2 337 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 OR2T33Q8NG76 320 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 HMGCLL1Q8TB92 370 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SMPDL3AQ92484 453 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 S100A16Q96FQ6 103 aaKnown RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TSNAXQ99598 290 aaKnown RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 THAP7Q9BT49 309 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SHROOM3Q8TF72 1996 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 FEZF1A0PJY2 475 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 MCIDASD6RGH6 385 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 KMOO15229 486 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 GASTP01350 101 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 PON3Q15166 354 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 RFPL4BQ6ZWI9 263 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 OTOP2Q7RTS6 562 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 LACC1Q8IV20 430 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 CPOQ8IVL8 374 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 INO80EQ8NBZ0 244 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SIMC1Q8NDZ2 872 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 NTMT1Q9BV86 223 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TMEM121BQ9BXQ6 578 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 OR51J1Q9H342 316 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 ZNF385DQ9H6B1 395 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 PRDM9Q9NQV7 894 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 FBXO8Q9NRD0 319 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 THSD1Q9NS62 852 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TMEM39AQ9NV64 488 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SLC25A37Q9NYZ2 338 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 DEC1Q9P2X7 70 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 MED31Q9Y3C7 131 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 PCDHGB2Q9Y5G2 931 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 F5P12259 2224 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3DA0A087WVF3 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3IA0A087WXS9 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3EA0A087X179 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3KA0A087X1G2 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3FA6NER0 549 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 A8MUA0 341 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 TBC1D3LB9A6J9 549 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 I6L893 689 aaPredicted RBP13.37□□□□□ -0.27
EPHB3-201ENST00000330394 SLC31A1O15431 190 aa13.37□□□□□ -0.27
EPHB3-201ENST00000330394 ITGA10O75578 1167 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms