RNA–Protein interactions for RNA: ENST00000328020.10

CMTM1-201, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 981 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-201ENST00000328020 ZNF385BQ569K4 471 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 ZNF628Q5EBL2 1059 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 SPANXN4Q5MJ08 99 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 HLA-DQA1Q5Y7H0 255 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 OR4F3Q6IEY1 312 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 FAM180BQ6P0A1 224 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 PAOXQ6QHF9 649 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 CPSF7Q8N684 471 aaKnown RBP13.12□□□□□ -0.31
CMTM1-201ENST00000328020 TRIML2Q8N7C3 387 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 ADCY4Q8NFM4 1077 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 SUN3Q8TAQ9 357 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 ELP5Q8TE02 316 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 MOAP1Q96BY2 351 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 CCT8L2Q96SF2 557 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 MESP1Q9BRJ9 268 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 SEMA4CQ9C0C4 833 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 DDX18Q9NVP1 670 aaKnown RBP13.12□□□□□ -0.31
CMTM1-201ENST00000328020 GPR83Q9NYM4 423 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 TAS2R9Q9NYW1 312 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 MAT2BQ9NZL9 334 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 BCAP29Q9UHQ4 241 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 ARL2BPQ9Y2Y0 163 aa13.12□□□□□ -0.31
CMTM1-201ENST00000328020 A0A1W2PS29 197 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 CCDC154A6NI56 674 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 A6NL46 340 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 A8MUI8 341 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 CDK2AP1O14519 115 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 FCHO1O14526 889 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 IGKV3-11P04433 115 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 SFTPCP11686 197 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 PSPHP78330 225 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 CHAF1BQ13112 559 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 MAPKAPK3Q16644 382 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 CRB2Q5IJ48 1285 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 C19orf48Q6RUI8 117 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 ZNF551Q7Z340 670 aaPredicted RBP13.11□□□□□ -0.31
CMTM1-201ENST00000328020 LGI4Q8N135 537 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 ANKS4BQ8N8V4 417 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 APCDD1LQ8NCL9 501 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 OR4A15Q8NGL6 344 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 ZNF721Q8TF20 911 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 TSPEARQ8WU66 669 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 TM9SF4Q92544 642 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 KAT2AQ92830 837 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 CTHRC1Q96CG8 243 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 ELP4Q96EB1 424 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 ITCHQ96J02 903 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 TEX37Q96LM6 180 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 ZNF354BQ96LW1 612 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 OR10A5Q9H207 317 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 CCDC167Q9P0B6 97 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 BTNL2Q9UIR0 455 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 PCDHGB7Q9Y5F8 929 aa13.11□□□□□ -0.31
CMTM1-201ENST00000328020 PIEZO2Q9H5I5 2752 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 TTC36A6NLP5 189 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 NR5A2O00482 541 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 EMC8O43402 210 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 DCTN3O75935 186 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SOX30O94993 753 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 C6orf47O95873 294 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 ITGAMP11215 1152 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 GPR143P51810 404 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 DGKQP52824 942 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 POLE2P56282 527 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SLC37A1P57057 533 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 DCAF7P61962 342 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 RCAN2Q14206 197 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 ZNHIT3Q15649 155 aaPredicted RBP13.1□□□□□ -0.31
CMTM1-201ENST00000328020 LTB4RQ15722 352 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 MEP1AQ16819 746 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 PRSS53Q2L4Q9 553 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 COL28A1Q2UY09 1125 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 ABHD17BQ5VST6 288 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 BLOC1S3Q6QNY0 202 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 FAM111BQ6SJ93 734 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 TMEM107Q6UX40 140 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 TMEM64Q6YI46 380 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 DGAT2L6Q6ZPD8 337 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SZRD1Q7Z422 152 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 PIGWQ7Z7B1 504 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 OR56A1Q8NGH5 318 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 NUBPLQ8TB37 319 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 BRIX1Q8TDN6 353 aaKnown RBP13.1□□□□□ -0.31
CMTM1-201ENST00000328020 EXTL1Q92935 676 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SPDL1Q96EA4 605 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 CCDC115Q96NT0 180 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 PANX1Q96RD7 426 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SLC25A23Q9BV35 468 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 NUDT9Q9BW91 350 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 ADNPQ9H2P0 1102 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 EPS8L2Q9H6S3 715 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SLAMF7Q9NQ25 335 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SAR1AQ9NR31 198 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 ZNF639Q9UID6 485 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 TUBD1Q9UJT1 453 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 C19orf53Q9UNZ5 99 aaPredicted RBP13.1□□□□□ -0.31
CMTM1-201ENST00000328020 PCDHGA9Q9Y5G4 932 aaKnown RBP13.1□□□□□ -0.31
CMTM1-201ENST00000328020 SNX8Q9Y5X2 465 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 CAPN7Q9Y6W3 813 aa13.1□□□□□ -0.31
CMTM1-201ENST00000328020 C2orf92A0A1B0GVN3 265 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms