RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 VRK3Q8IV63 474 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 GPC2Q8N158 579 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 CIDECQ96AQ7 238 aaPredicted RBP12.11□□□□□ -0.47
CCDC60-201ENST00000327554 HIST1H2AHQ96KK5 128 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 HIST1H2AJQ99878 128 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 H2AFJQ9BTM1 129 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 C11orf49Q9H6J7 331 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 DLL4Q9NR61 685 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 SEMA3GQ9NS98 782 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 TRPM5Q9NZQ8 1165 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 MAB21L2Q9Y586 359 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 LOC105369274A0A096LPK9 316 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 TEX13CA0A0J9YWL9 993 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 GPR171O14626 319 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 UGDHO60701 494 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 CLDN7O95471 211 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 ACP2P11117 423 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 HOXC8P31273 242 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 ACLYP53396 1101 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 DCDC1P59894 354 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 B2MP61769 119 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 STK11Q15831 433 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 MPEG1Q2M385 716 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 PRAMEF19Q5SWL8 479 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 B3GLCTQ6Y288 498 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 OTOP2Q7RTS6 562 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 LINC00518Q8N0U6 118 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 OR4N4Q8N0Y3 316 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 ATAD1Q8NBU5 361 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 SRFBP1Q8NEF9 429 aaKnown RBP12.11□□□□□ -0.47
CCDC60-201ENST00000327554 GPR156Q8NFN8 814 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 GPR32P1Q8NGA4 272 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 OR6M1Q8NGM8 313 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 RNFT2Q96EX2 444 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 OTUB1Q96FW1 271 aaPredicted RBP12.11□□□□□ -0.47
CCDC60-201ENST00000327554 RADILQ96JH8 1075 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 TMEM175Q9BSA9 504 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 FUZQ9BT04 418 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 TMED9Q9BVK6 235 aa12.11□□□□□ -0.47
CCDC60-201ENST00000327554 IMP3Q9NV31 184 aaKnown RBP12.11□□□□□ -0.47
CCDC60-201ENST00000327554 A0A1B0GVI7 797 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 MFSD2BA6NFX1 497 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 TUBAL3A6NHL2 446 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 PCP4L1A6NKN8 68 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 E7EQ34 232 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 GABRPO00591 440 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 CLDN11O75508 207 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 SULT1A3P0DMM9 295 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 SULT1A4P0DMN0 295 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 AHCYP23526 432 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 TIA1P31483 386 aaKnown RBP eCLIP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 B4GALNT1Q00973 533 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 C2orf80Q0P641 193 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 RAB40BQ12829 278 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 GINS1Q14691 196 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 CDKN3Q16667 212 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 ARMC12Q5T9G4 340 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 RNF219Q5W0B1 726 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 TFAP2EQ6VUC0 442 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 NR2C2APQ86WQ0 139 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 OR2T4Q8NH00 348 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 SKA2Q8WVK7 121 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 OTULINQ96BN8 352 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 RBCK1Q9BYM8 510 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 ENAMQ9NRM1 1142 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 CYSLTR2Q9NS75 346 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 KLHL42Q9P2K6 505 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 KIF25Q9UIL4 384 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 MBD1Q9UIS9 605 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 TRPV2Q9Y5S1 764 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 C2orf92A0A1B0GVN3 265 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 GNG14A0A1W2PPG7 69 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 HRO43593 1189 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 B4GALT3O60512 393 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 H1F0P07305 194 aaKnown RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 CTSHP09668 335 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 KELP23276 732 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 NSG1P42857 185 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 VSX2P58304 361 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 BCL2L1Q07817 233 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 GPR33Q49SQ1 333 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 RPS26P11Q5JNZ5 115 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 BHLHB9Q6PI77 547 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 SHFQ7M4L6 423 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 TLK2Q86UE8 772 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 RBM45Q8IUH3 476 aaKnown RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 CXorf40BQ96DE9 158 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 NLNQ9BYT8 704 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 MS4A7Q9GZW8 240 aaPredicted RBP12.1□□□□□ -0.47
CCDC60-201ENST00000327554 DPAGT1Q9H3H5 408 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 REEP4Q9H6H4 257 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 TBC1D17Q9HA65 648 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 BRF2Q9HAW0 419 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 SDHAF2Q9NX18 166 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 NUBP2Q9Y5Y2 271 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 VWA8A3KMH1 1905 aa12.1□□□□□ -0.47
CCDC60-201ENST00000327554 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.09□□□□□ -0.47
CCDC60-201ENST00000327554 MTMR11A4FU01 709 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 AGAP14A8MT82 685 aa12.09□□□□□ -0.47
CCDC60-201ENST00000327554 GFYI3L273 518 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms