RNA–Protein interactions for RNA: ENST00000327154.10

RPAIN-201, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 815 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-201ENST00000327154 CACNA1CQ13936 2221 aa12.98□□□□□ -0.33
RPAIN-201ENST00000327154 ZNF407Q9C0G0 2248 aa12.98□□□□□ -0.33
RPAIN-201ENST00000327154 CSMD2Q7Z408 3487 aa12.98□□□□□ -0.33
RPAIN-201ENST00000327154 TACC2O95359 2948 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 CAPN14A8MX76 684 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 NT5EP21589 574 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 ADH7P40394 386 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 ZFP36L2P47974 494 aaKnown RBP12.97□□□□□ -0.33
RPAIN-201ENST00000327154 TRPC1P48995 793 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 MAPK12P53778 367 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 FBXW4P57775 412 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 FUT7Q11130 342 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 ERCC6LQ2NKX8 1250 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 C10orf62Q5T681 223 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-201ENST00000327154 C1orf185Q5T7R7 199 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 TMEM198Q66K66 360 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 PAGE2Q7Z2X7 111 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 COMMD6Q7Z4G1 85 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 LIX1LQ8IVB5 337 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 DMRTC2Q8IXT2 367 aaPredicted RBP12.97□□□□□ -0.33
RPAIN-201ENST00000327154 METTL4Q8N3J2 472 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 TMEM151AQ8N4L1 468 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 ZNF615Q8N8J6 731 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 TRPC4APQ8TEL6 797 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.97□□□□□ -0.332e-7■■■■■ 32.7
RPAIN-201ENST00000327154 DIO2Q92813 273 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 ADIPOR1Q96A54 375 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 SLC6A15Q9H2J7 730 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 MRPL46Q9H2W6 279 aaKnown RBP12.97□□□□□ -0.33
RPAIN-201ENST00000327154 EPB41L4BQ9H329 900 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 ACKR4Q9NPB9 350 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 RYDENQ9NUL5 291 aaKnown RBP12.97□□□□□ -0.33
RPAIN-201ENST00000327154 ZNF180Q9UJW8 692 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 SLC12A4Q9UP95 1085 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 NPFFR2Q9Y5X5 522 aa12.97□□□□□ -0.33
RPAIN-201ENST00000327154 POLQO75417 2590 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 ANKRD33BA6NCL7 494 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 FOXO6A8MYZ6 492 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 TP53I11O14683 189 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 TRIM3O75382 744 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-201ENST00000327154 TRAPPC6AO75865 159 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 OTCP00480 354 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 PDYNP01213 254 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 RPS17P08708 135 aaKnown RBP12.96□□□□□ -0.33
RPAIN-201ENST00000327154 HOXD4P09016 255 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-201ENST00000327154 SBK3P0C264 359 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 CPMP14384 443 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 GABRA1P14867 456 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 PORP16435 677 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-201ENST00000327154 S1PR1P21453 382 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 CNTFP26441 200 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 GDF1P27539 372 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 GGTA1PQ4G0N0 100 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 FAM219BQ5XKK7 198 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 BICRALQ6AI39 1079 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 LETMD1Q6P1Q0 360 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 PRR22Q8IZ63 422 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 MMP21Q8N119 569 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 LIX1Q8N485 282 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 NEIL3Q8TAT5 605 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 SPPL2AQ8TCT8 520 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 ZNF483Q8TF39 744 aaPredicted RBP12.96□□□□□ -0.33
RPAIN-201ENST00000327154 SELENOMQ8WWX9 145 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 QPCTLQ9NXS2 382 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 B4GALT7Q9UBV7 327 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 CES1P1Q9UKY3 287 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 PCDHA9Q9Y5H5 950 aa12.96□□□□□ -0.33
RPAIN-201ENST00000327154 DNAJC13O75165 2243 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 EML6Q6ZMW3 1958 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 A8MT66 165 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 GUCY1B2O75343 617 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 ERAL1O75616 437 aaKnown RBP12.95□□□□□ -0.34
RPAIN-201ENST00000327154 SNRPAP09012 282 aaKnown RBP12.95□□□□□ -0.34
RPAIN-201ENST00000327154 GCAP28676 217 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 HSD17B3P37058 310 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 FEN1P39748 380 aaKnown RBP12.95□□□□□ -0.34
RPAIN-201ENST00000327154 NRG3P56975 720 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 GALNT1Q10472 559 aaPredicted RBP12.95□□□□□ -0.34
RPAIN-201ENST00000327154 RPS6KA2Q15349 733 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 TBCELQ5QJ74 424 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 LGSNQ5TDP6 509 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 C6orf163Q5TEZ5 329 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 SLC48A1Q6P1K1 146 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 CDH24Q86UP0 819 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 CLYBLQ8N0X4 340 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 MYRIPQ8NFW9 859 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 OR7G1Q8NGA0 311 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 TM4SF18Q96CE8 201 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 ZNF597Q96LX8 424 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 RILPQ96NA2 401 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 GNRHR2Q96P88 292 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 ZNF559Q9BR84 538 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 ANGPTL4Q9BY76 406 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 ZNF225Q9UK10 706 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 SNX6Q9UNH7 406 aa12.95□□□□□ -0.34
RPAIN-201ENST00000327154 C15orf38-AP3S2A0A0A6YYH1 394 aa12.94□□□□□ -0.34
RPAIN-201ENST00000327154 C1orf226A1L170 272 aa12.94□□□□□ -0.34
RPAIN-201ENST00000327154 GOLGA6L10A6NI86 522 aa12.94□□□□□ -0.34
RPAIN-201ENST00000327154 SMIM23A6NLE4 172 aa12.94□□□□□ -0.34
RPAIN-201ENST00000327154 OR4F21O95013 312 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms