RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 PRAMEF27A3QJZ7 478 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 TEX28O15482 410 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ELFN1P0C7U0 828 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 FAM157BP0CG42 384 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ALAS2P22557 587 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 GABRA5P31644 462 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 MAPK12P53778 367 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 CCL23P55773 120 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 EFR3AQ14156 821 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 PRAMEF14Q5SWL7 426 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 OR2G6Q5TZ20 316 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 PRAMEF13Q5VWM6 474 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 TMEM215Q68D42 235 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 MRGPREQ86SM8 312 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 PDZD3Q86UT5 571 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 TRIM48Q8IWZ4 208 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 KRT78Q8N1N4 520 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 SYT14Q8NB59 555 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 MORN4Q8NDC4 146 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 DUSP18Q8NEJ0 188 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 OR4K5Q8NGD3 323 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 TMEM163Q8TC26 289 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 UBASH3BQ8TF42 649 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 C1GALT1C1Q96EU7 318 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ZNF764Q96H86 408 aaPredicted RBP18.06■□□□□ 0.48
RTN4-201ENST00000317610 MRGPRX3Q96LB0 322 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 ABCG4Q9H172 646 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 RHBGQ9H310 441 aa18.06■□□□□ 0.48
RTN4-201ENST00000317610 RPRD1BQ9NQG5 326 aaKnown RBP18.06■□□□□ 0.48
RTN4-201ENST00000317610 PRODHO43272 600 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 SOD1P00441 154 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 EPHX1P07099 455 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 GAAP10253 952 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 CHRNB1P11230 501 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 XPAP23025 273 aaPredicted RBP18.05■□□□□ 0.48
RTN4-201ENST00000317610 PTBP1P26599 531 aaKnown RBP eCLIP18.05■□□□□ 0.481e-7■■■■□ 26.1
RTN4-201ENST00000317610 SSTR4P31391 388 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 BSGP35613 385 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 FAPQ12884 760 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 GPR162Q16538 588 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 CRTC2Q53ET0 693 aaPredicted RBP18.05■□□□□ 0.48
RTN4-201ENST00000317610 SPOUT1Q5T280 376 aaKnown RBP18.05■□□□□ 0.48
RTN4-201ENST00000317610 KHDRBS2Q5VWX1 349 aaKnown RBP18.05■□□□□ 0.48
RTN4-201ENST00000317610 UFD1Q92890 307 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 GPA33Q99795 319 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 BEX2Q9BXY8 128 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 SYNDIG1Q9H7V2 258 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 NIPAL2Q9H841 368 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 RBFOX1Q9NWB1 397 aaKnown RBP18.05■□□□□ 0.48
RTN4-201ENST00000317610 IL36AQ9UHA7 158 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 GSTK1Q9Y2Q3 226 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 EXOSC1Q9Y3B2 195 aaKnown RBP18.05■□□□□ 0.48
RTN4-201ENST00000317610 NDUFB5O43674 189 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 SLC28A2O43868 658 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 ACADLP28330 430 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 SMSP52788 366 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 HSPB3Q12988 150 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 SPDYE7PQ495Y7 208 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 PLET1Q6UQ28 207 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 ZNF485Q8NCK3 441 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 NLGN4YQ8NFZ3 816 aaPredicted RBP18.05■□□□□ 0.48
RTN4-201ENST00000317610 HCAR2Q8TDS4 363 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 FNDC11Q9BVV2 318 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 P2RX2Q9UBL9 471 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 CCL26Q9Y258 94 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 PCDHGB7Q9Y5F8 929 aa18.05■□□□□ 0.48
RTN4-201ENST00000317610 TRDV1A0A1B0GX56 115 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 M0R3H8 397 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 APEX1P27695 318 aaKnown RBP18.04■□□□□ 0.48
RTN4-201ENST00000317610 GZMKP49863 264 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 FABP5Q01469 135 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 TNK1Q13470 666 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 RIN1Q13671 783 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 TATDN3Q17R31 274 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 KIAA0907Q7Z7F0 614 aaPredicted RBP18.04■□□□□ 0.48
RTN4-201ENST00000317610 YIPF7Q8N8F6 280 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 VN1R2Q8NFZ6 395 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 RNFT2Q96EX2 444 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 MS4A8Q9BY19 250 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 SRRDQ9UH36 339 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 SH3BP5O60239 455 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 CHRM5P08912 532 aaPredicted RBP18.04■□□□□ 0.48
RTN4-201ENST00000317610 SLC2A2P11168 524 aaPredicted RBP18.04■□□□□ 0.48
RTN4-201ENST00000317610 GSTM3P21266 225 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 MAN2A2P49641 1150 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 UBE3AQ05086 875 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 SNAPC1Q16533 368 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 SYPL1Q16563 259 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 MINDY4Q4G0A6 757 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 CCDC58Q4VC31 144 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 SLC36A4Q6YBV0 504 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 IQCHQ86VS3 1027 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 KIF18BQ86Y91 864 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 PLCZ1Q86YW0 608 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 GATAD2BQ8WXI9 593 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 DTD2Q96FN9 168 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 LINC00615Q96LM1 132 aaPredicted RBP18.04■□□□□ 0.48
RTN4-201ENST00000317610 COQ10AQ96MF6 247 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 TM9SF2Q99805 663 aa18.04■□□□□ 0.48
RTN4-201ENST00000317610 ARHGAP9Q9BRR9 750 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms