RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 AUTS2Q8WXX7 1259 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 GLYATL1Q969I3 302 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 KIAA1143Q96AT1 154 aaPredicted RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 UPRTQ96BW1 309 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 ZNF582Q96NG8 517 aaPredicted RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 TEFMQ96QE5 360 aaKnown RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 SGPP1Q9BX95 441 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 SMG9Q9H0W8 520 aaKnown RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 ABCG4Q9H172 646 aa12.73□□□□□ -0.37
SKA3-202ENST00000314759 MRPL17Q9NRX2 175 aaKnown RBP12.73□□□□□ -0.37
SKA3-202ENST00000314759 NUDT1P36639 197 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 MAP2K3P46734 347 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 KCNJ5P48544 419 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 WNT4P56705 351 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 GINS1Q14691 196 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 P2RY14Q15391 338 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 BRAT1Q6PJG6 821 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 COMTD1Q86VU5 262 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 GATAD2BQ8WXI9 593 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 FGF11Q92914 225 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 OMA1Q96E52 524 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ZNF354BQ96LW1 612 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 MED18Q9BUE0 208 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 NIPAL2Q9H841 368 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ANKRA2Q9H9E1 313 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 GALNT9Q9HCQ5 603 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ZSCAN32Q9NX65 697 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 SLC25A13Q9UJS0 675 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ACAD8Q9UKU7 415 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 B8ZZF3 427 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 SHOXO15266 292 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 NME6O75414 186 aaPredicted RBP12.72□□□□□ -0.37
SKA3-202ENST00000314759 M6PRP20645 277 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 GIPRP48546 466 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 TAP2Q03519 686 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 CRTC2Q53ET0 693 aaPredicted RBP12.72□□□□□ -0.37
SKA3-202ENST00000314759 SLC25A30Q5SVS4 291 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 LCN1P1Q5VSP4 162 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 PODNL1Q6PEZ8 512 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 NXPE4Q6UWF7 544 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 IDO2Q6ZQW0 420 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 IKBIPQ70UQ0 350 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ZER1Q7Z7L7 766 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 LSMEM1Q8N8F7 131 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 SLC5A11Q8WWX8 675 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 GPA33Q99795 319 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 B3GAT2Q9NPZ5 323 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 COMMD3Q9UBI1 195 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 A4GNTQ9UNA3 340 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 WASHC1A8K0Z3 465 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ANHXE9PGG2 379 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 HMGN4O00479 90 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 STK25O00506 426 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 GRM6O15303 877 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 PLOD3O60568 738 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 SOD2P04179 222 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 GJA1P17302 382 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 MMP11P24347 488 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 MANFP55145 182 aaKnown RBP12.72□□□□□ -0.37
SKA3-202ENST00000314759 EFNB1P98172 346 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ARHGEF6Q15052 776 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ZNF284Q2VY69 593 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 TIGD3Q6B0B8 471 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 CREB3L2Q70SY1 520 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 ADGRF3Q8IZF5 1079 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 PPP1R3EQ9H7J1 279 aa12.72□□□□□ -0.37
SKA3-202ENST00000314759 TRIM45Q9H8W5 580 aaPredicted RBP12.72□□□□□ -0.37
SKA3-202ENST00000314759 PLXND1Q9Y4D7 1925 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 LOC102723532A0A0G2JNH3 316 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 LEFTY1O75610 366 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 SLC2A2P11168 524 aaPredicted RBP12.71□□□□□ -0.37
SKA3-202ENST00000314759 TIMP2P16035 220 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 DDX5P17844 614 aaKnown RBP12.71□□□□□ -0.37
SKA3-202ENST00000314759 AP2S1P53680 142 aaPredicted RBP12.71□□□□□ -0.37
SKA3-202ENST00000314759 FABP5Q01469 135 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 RAB33AQ14088 237 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 C3orf38Q5JPI3 329 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 PXDC1Q5TGL8 231 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 QSOX2Q6ZRP7 698 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 ZNF767PQ75MW2 155 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 C6orf120Q7Z4R8 191 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 LRRC56Q8IYG6 542 aaPredicted RBP12.71□□□□□ -0.37
SKA3-202ENST00000314759 CFAP206Q8IYR0 622 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 Q8N402 240 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 SOSTQ9BQB4 213 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 RNF186Q9NXI6 227 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 C5AR2Q9P296 337 aa12.71□□□□□ -0.37
SKA3-202ENST00000314759 CXorf51AA0A1B0GTR3 108 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 HLA-DQB1P01920 261 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 FAM157BP0CG42 384 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 MYL12AP19105 171 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 MAPK12P53778 367 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 POU6F2P78424 691 aaPredicted RBP12.71□□□□□ -0.38
SKA3-202ENST00000314759 HSPB3Q12988 150 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 TPBGQ13641 420 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 POM121L1PQ3SYA9 428 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 ZNF658BQ4V348 819 aaPredicted RBP12.71□□□□□ -0.38
SKA3-202ENST00000314759 FAM205BPQ63HN1 556 aa12.71□□□□□ -0.38
SKA3-202ENST00000314759 CNIH2Q6PI25 160 aa12.71□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms