RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 FRKP42685 505 aaPredicted RBP13.1□□□□□ -0.31
MKS1-201ENST00000313863 INPP1P49441 399 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 RPS26P62854 115 aaKnown RBP13.1□□□□□ -0.31
MKS1-201ENST00000313863 MEF2AQ02078 507 aaPredicted RBP13.1□□□□□ -0.31
MKS1-201ENST00000313863 C19orf57Q0VDD7 668 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 FAPQ12884 760 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 RIN1Q13671 783 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 SNAP47Q5SQN1 464 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 KHDRBS2Q5VWX1 349 aaKnown RBP13.1□□□□□ -0.31
MKS1-201ENST00000313863 ASTLQ6HA08 431 aaPredicted RBP13.1□□□□□ -0.31
MKS1-201ENST00000313863 C1orf94Q6P1W5 598 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 GJD3Q8N144 294 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 Q8N402 240 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 TBC1D19Q8N5T2 526 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 OR4K5Q8NGD3 323 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 BBS10Q8TAM1 723 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 TEX47Q8TBZ9 253 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 RNFT2Q96EX2 444 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 FYTTD1Q96QD9 318 aaKnown RBP13.1□□□□□ -0.31
MKS1-201ENST00000313863 DPEP2Q9H4A9 486 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 PELI2Q9HAT8 420 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 RNF186Q9NXI6 227 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 TAS2R7Q9NYW3 318 aa13.1□□□□□ -0.31
MKS1-201ENST00000313863 C17orf113A0A1B0GUU1 675 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 CASKO14936 926 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 ORC5O43913 435 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 C1QBP02746 253 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 MMP11P24347 488 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 TGM4P49221 684 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 CCT3P49368 545 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 RPS25P62851 125 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 TNK1Q13470 666 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 MLC1Q15049 377 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 FAM209AQ5JX71 171 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 CD200R1LQ6Q8B3 271 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 LIPIQ6XZB0 460 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 FAM83HQ6ZRV2 1179 aaPredicted RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 TRMT11Q7Z4G4 463 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 TRAPPC5Q8IUR0 188 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 IQCF1Q8N6M8 205 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 ATP6V1C2Q8NEY4 427 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 RAB8BQ92930 207 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 RFKQ969G6 155 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 SLC35G5Q96KT7 338 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 PRRC1Q96M27 445 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 CAMK1GQ96NX5 476 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 TREX2Q9BQ50 279 aaPredicted RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 AIF1LQ9BQI0 150 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 PLSCR3Q9NRY6 295 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 NDRG2Q9UN36 371 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 SF3B6Q9Y3B4 125 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 BOLA1Q9Y3E2 137 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 FAM240BA0A1B0GVZ2 78 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 PLPP1O14494 284 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 SLC19A2O60779 497 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 SEMA7AO75326 666 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 SLC43A1O75387 559 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 CXCL10P02778 98 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 CSF2P04141 144 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 NR2F1P10589 423 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 ALAS2P22557 587 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 KELP23276 732 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 MTNR1AP48039 350 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 GZMKP49863 264 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 PCBP4P57723 403 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 EFNB1P98172 346 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 GALK2Q01415 458 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 HSPB3Q12988 150 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 SF3A2Q15428 464 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 TATDN3Q17R31 274 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 SLC27A4Q6P1M0 643 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 ZNF767PQ75MW2 155 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 BCDIN3DQ7Z5W3 292 aaKnown RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 C17orf64Q86WR6 236 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 TMEM25Q86YD3 366 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 TMC8Q8IU68 726 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 OR52P1PQ8NH57 321 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 ANGPTL6Q8NI99 470 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 GNPDA2Q8TDQ7 276 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 TTC9Q92623 222 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 RAD51AP1Q96B01 352 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 TM4SF18Q96CE8 201 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 SOSTQ9BQB4 213 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 PITHD1Q9GZP4 211 aaPredicted RBP13.09□□□□□ -0.31
MKS1-201ENST00000313863 SPNS1Q9H2V7 528 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 FBXW2Q9UKT8 454 aa13.09□□□□□ -0.31
MKS1-201ENST00000313863 CASC3O15234 703 aaKnown RBP13.08□□□□□ -0.32
MKS1-201ENST00000313863 HLA-DPB1P04440 258 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 CCNYL3P0C7X3 344 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 PSKH1P11801 424 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 HSD17B2P37059 387 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 KHKP50053 298 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 PIN1Q13526 163 aaPredicted RBP13.08□□□□□ -0.32
MKS1-201ENST00000313863 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.08□□□□□ -0.32
MKS1-201ENST00000313863 TYW3Q6IPR3 259 aaKnown RBP13.08□□□□□ -0.32
MKS1-201ENST00000313863 CNIH2Q6PI25 160 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 ZER1Q7Z7L7 766 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 PDZD3Q86UT5 571 aa13.08□□□□□ -0.32
MKS1-201ENST00000313863 ADIPOR2Q86V24 386 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms