RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 C16orf78Q8WTQ4 265 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 TP53INP1Q96A56 240 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 APOPT1Q96IL0 206 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 GAL3ST4Q96RP7 486 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM173AQ9BQD7 235 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 OR10A5Q9H207 317 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 TUBB1Q9H4B7 451 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 TUBA8Q9NY65 449 aaPredicted RBP13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 SLC17A7Q9P2U7 560 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 SH3BGRL2Q9UJC5 107 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 DLGAP4Q9Y2H0 992 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 MEMO1Q9Y316 297 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 PTGDR2Q9Y5Y4 395 aa13.45□□□□□ -0.26
PPP1CA-201ENST00000312989 CSMD1Q96PZ7 3565 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 NAV2Q8IVL1 2488 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 A0A1B0GTH9 108 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 TFECO14948 347 aaPredicted RBP13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 IGHG3P01860 377 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 RFPL3SP0C7P2 107 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 PER3P56645 1201 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 RBPJQ06330 500 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 TRMT12Q53H54 448 aaKnown RBP13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 SPIN4Q56A73 249 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 RNF165Q6ZSG1 346 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 SLC29A4Q7RTT9 530 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 VWA5B2Q8N398 1253 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 MARVELD2Q8N4S9 558 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 C17orf47Q8NEP4 570 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM57AQ8TBR7 257 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 SLC22A8Q8TCC7 542 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 MAGED4Q96JG8 741 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 TMEM109Q9BVC6 243 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 EBPLQ9BY08 206 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 SACM1LQ9NTJ5 587 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 NMRK1Q9NWW6 199 aa13.44□□□□□ -0.26
PPP1CA-201ENST00000312989 TEX15Q9BXT5 2789 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 CENPEQ02224 2701 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 C2orf92A0A1B0GVN3 265 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM166BA8MTA8 275 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 DYRK3O43781 588 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 GUCY1B2O75343 617 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ERAL1O75616 437 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 CSNK2A2P19784 350 aaPredicted RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ENDOUP21128 410 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 NT5EP21589 574 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 PRPH2P23942 346 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 GRNP28799 593 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ETV4P43268 484 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 EMDP50402 254 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 NAA20P61599 178 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 PPIAP62937 165 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 MRPS35P82673 323 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 EXOSC7Q15024 291 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ERCC6LQ2NKX8 1250 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 UGT3A2Q3SY77 523 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 FNDC7Q5VTL7 733 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 CES4AQ5XG92 561 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 CLEC6AQ6EIG7 209 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 DESI1Q6ICB0 168 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 Q6ZSR9 355 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 FBXW8Q8N3Y1 598 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ADCY4Q8NFM4 1077 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 OR7G1Q8NGA0 311 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 OR2T11Q8NH01 316 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ZNF675Q8TD23 568 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 KLHL29Q96CT2 875 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 FCRL1Q96LA6 429 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 MECRQ9BV79 373 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ITPAQ9BY32 194 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 SHCBP1LQ9BZQ2 653 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 NXF5Q9H1B4 397 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 ZNF703Q9H7S9 590 aaPredicted RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 IL1RL2Q9HB29 575 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 RYDENQ9NUL5 291 aaKnown RBP13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 RAB21Q9UL25 225 aa13.43□□□□□ -0.26
PPP1CA-201ENST00000312989 A0A1B0GVC2 190 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 TLDC2A0PJX2 215 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 H3BQF6 201 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 TYROBPO43914 113 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 NME6O75414 186 aaPredicted RBP13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 RSL1D1O76021 490 aaKnown RBP13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 LRATO95237 230 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 CHRNGP07510 517 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 DRD2P14416 443 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 PCSK2P16519 638 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ALDH3A1P30838 453 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 MAGEA5P43359 124 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ACSM2AQ08AH3 577 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 PRAMEF20Q5VT98 475 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 KANK2Q63ZY3 851 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ACSM2BQ68CK6 577 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 BICRALQ6AI39 1079 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM71E1Q6IPT2 247 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 C3P1Q6ZMU1 363 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM47EQ6ZV65 393 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 LRRC25Q8N386 305 aaPredicted RBP13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 RPRMLQ8N4K4 120 aa13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 ZNF808Q8N4W9 903 aaPredicted RBP13.42□□□□□ -0.26
PPP1CA-201ENST00000312989 FAM111AQ96PZ2 611 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms