RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 MEAF6Q9HAF1 191 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 SPTBP11277 2137 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 A0A0U1RQJ8 604 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 EMC8O43402 210 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 PLATP00750 562 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 USB1Q9BQ65 265 aaKnown RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 NTPCRQ9BSD7 190 aaKnown RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 CLN5O75503 358 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 PENKP01210 267 aaPredicted RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 PEA15Q15121 130 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 PNCKQ6P2M8 343 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 PITX2Q99697 317 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 ACSL6Q9UKU0 697 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 LOC102723532A0A0G2JNH3 316 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF704Q6ZNC4 412 aaPredicted RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 CERKQ8TCT0 537 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 NDRG1Q92597 394 aaKnown RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 OPN1SWP03999 348 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 DRD2P14416 443 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 CHRNA6Q15825 494 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 ECM1Q16610 540 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 NLE1Q9NVX2 485 aaPredicted RBP14.82□□□□□ -0.04
HCFC1-201ENST00000310441 NUBP2Q9Y5Y2 271 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 TCRBV7S2A1N4TA0A589 114 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 C20orf202A1L168 122 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 YJEFN3A6XGL0 299 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 GPR37L1O60883 481 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 CDK1P06493 297 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 C6P13671 934 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 AKR1C4P17516 323 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 CLVS2Q5SYC1 327 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 TXNDC15Q96J42 360 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 EVA1AQ9H8M9 152 aa14.82□□□□□ -0.04
HCFC1-201ENST00000310441 GGT3PA6NGU5 568 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 CCL22O00626 93 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 CASC3O15234 703 aaKnown RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 HTRA2O43464 458 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 CD6P30203 668 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SPHARQ15513 63 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SLC25A31Q9H0C2 315 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 TUBG2Q9NRH3 451 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 B3GNT2Q9NY97 397 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 RFPL2O75678 378 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 HBQ1P09105 142 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 UBL4AP11441 157 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 AK4P27144 223 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 DGKEP52429 567 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 CHADLQ6NUI6 762 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 KDELC1Q6UW63 502 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 TSPYL5Q86VY4 417 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SH3RF2Q8TEC5 729 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 JPH3Q8WXH2 748 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 NUP188Q5SRE5 1749 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 C12orf71A8MTZ7 269 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 B4GALT2O60909 372 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 MEP1AQ16819 746 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 DRAXINQ8NBI3 349 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 PAPD5Q8NDF8 572 aaKnown RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 MAL2Q969L2 176 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 FUNDC2Q9BWH2 189 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 A0A087WUU8 490 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 GALTP07902 379 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 NDUFV2P19404 249 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 RAB28P51157 221 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 DBPQ10586 325 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SLC2A7Q6PXP3 512 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SHFQ7M4L6 423 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 PRSS48Q7RTY5 328 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SERINC5Q86VE9 423 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.81□□□□□ -0.042e-7■■□□□ 13.5
HCFC1-201ENST00000310441 KCNJ16Q9NPI9 418 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 OR2S2Q9NQN1 319 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 ARHGEF15O94989 841 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 ADH7P40394 386 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 GINS1Q14691 196 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SVBPQ8N300 66 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 NAXEQ8NCW5 288 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 OR8K5Q8NH50 307 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 ZNF419Q96HQ0 510 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SAMD10Q9BYL1 202 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 MYBPHLA2RUH7 354 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 TGM5O43548 720 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 KDELR3O43731 214 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 CPT2P23786 658 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 HTR1EP28566 365 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 RPL23AP62750 156 aaKnown RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 FPGSQ05932 587 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 ZC3H14Q6PJT7 736 aaKnown RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 LRCH3Q96II8 777 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SAV1Q9H4B6 383 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 MINDY3Q9H8M7 445 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 INSL6Q9Y581 213 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 NID2Q14112 1375 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 GCGRP47871 477 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 UBE2NP61088 152 aaKnown RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 CLEC20AQ6ZU45 233 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 COMMD7Q86VX2 200 aa14.81□□□□□ -0.04
HCFC1-201ENST00000310441 SETD7Q8WTS6 366 aaKnown RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 CIDECQ96AQ7 238 aaPredicted RBP14.81□□□□□ -0.04
HCFC1-201ENST00000310441 GFOD1Q9NXC2 390 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms