RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 C8orf4Q9NR00 106 aa13.23□□□□□ -0.29
EIF3F-201ENST00000309828 SIDT1Q9NXL6 827 aaKnown RBP13.23□□□□□ -0.29
EIF3F-201ENST00000309828 TRPC4Q9UBN4 977 aa13.23□□□□□ -0.29
EIF3F-201ENST00000309828 NDOR1Q9UHB4 597 aa13.23□□□□□ -0.29
EIF3F-201ENST00000309828 CNOT11Q9UKZ1 510 aaKnown RBP13.23□□□□□ -0.29
EIF3F-201ENST00000309828 LIPT1Q9Y234 373 aa13.23□□□□□ -0.29
EIF3F-201ENST00000309828 MUC6Q6W4X9 2439 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 CASC3O15234 703 aaKnown RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 SUV39H1O43463 412 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 OR10H2O60403 315 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 LRP3O75074 770 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 ZNF682O95780 498 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 ALAS2P22557 587 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 PEX2P28328 305 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 MAGEA2P43356 314 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 XCR1P46094 333 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 CASP9P55211 416 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 RPS26P62854 115 aaKnown RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 ID2Q02363 134 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 ZFP36L1Q07352 338 aaKnown RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 MAP4K2Q12851 820 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 LASP1Q14847 261 aaKnown RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 PRICKLE4Q2TBC4 344 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 CYBRD1Q53TN4 286 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 PHF19Q5T6S3 580 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 HMBOX1Q6NT76 420 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 MFSD12Q6NUT3 480 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 CDC73Q6P1J9 531 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 SLC38A5Q8WUX1 472 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 LZICQ8WZA0 190 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 CTHRC1Q96CG8 243 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 GIMAP5Q96F15 307 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 RBM18Q96H35 190 aaKnown RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 MAGED4Q96JG8 741 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 OR6C1Q96RD1 312 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 TACO1Q9BSH4 297 aaKnown RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 DOHHQ9BU89 302 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 BDH2Q9BUT1 245 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 BCL2L10Q9HD36 194 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 MKKSQ9NPJ1 570 aaPredicted RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 TMEM9BQ9NQ34 198 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 MAT2BQ9NZL9 334 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 CALML5Q9NZT1 146 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 TMEM184BQ9Y519 407 aaPredicted RBP13.22□□□□□ -0.29
EIF3F-201ENST00000309828 LRRC42Q9Y546 428 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 V9GYQ6 96 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 SCN3AQ9NY46 2000 aa13.22□□□□□ -0.29
EIF3F-201ENST00000309828 H0YJX3 145 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 CDX4O14627 284 aaPredicted RBP13.21□□□□□ -0.29
EIF3F-201ENST00000309828 CLOCKO15516 846 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 SLC28A2O43868 658 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 COQ9O75208 318 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 GCM2O75603 506 aaPredicted RBP13.21□□□□□ -0.29
EIF3F-201ENST00000309828 ONECUT2O95948 504 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 SEMG1P04279 462 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 BCHEP06276 602 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 OR12D1P0DN82 309 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 FGF5P12034 268 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 CD59P13987 128 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 CSTF2P33240 577 aaKnown RBP eCLIP13.21□□□□□ -0.29
EIF3F-201ENST00000309828 STT3AP46977 705 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 MAN2A2P49641 1150 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 CRISP3P54108 245 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 SELENOWP63302 87 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 MGAT2Q10469 447 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 ILKQ13418 452 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 IL11RAQ14626 422 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 SYT16Q17RD7 645 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 GRAMD1BQ3KR37 738 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 ATAD3BQ5T9A4 648 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 LPCAT4Q643R3 524 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 PRR23CQ6ZRP0 262 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 QSOX2Q6ZRP7 698 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 NAXDQ8IW45 347 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 METTL27Q8N6F8 245 aaPredicted RBP13.21□□□□□ -0.29
EIF3F-201ENST00000309828 FAM86B1Q8N7N1 296 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 AGBL5Q8NDL9 886 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 BBS10Q8TAM1 723 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 XAGE5Q8WWM1 108 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 RASSF5Q8WWW0 418 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 DNAJC9Q8WXX5 260 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 RAB8BQ92930 207 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 TMEM19Q96HH6 336 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 DGAT2Q96PD7 388 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 OR7D2Q96RA2 312 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 ZNF607Q96SK3 696 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 ZNF184Q99676 751 aaPredicted RBP13.21□□□□□ -0.29
EIF3F-201ENST00000309828 CDC6Q99741 560 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 SPATA5L1Q9BVQ7 753 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 BTBD2Q9BX70 525 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 ALOXE3Q9BYJ1 711 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 SLC7A5P2Q9GIP4 190 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 CXorf21Q9HAI6 301 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 LANCL2Q9NS86 450 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 EXD2Q9NVH0 621 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 GIN1Q9NXP7 522 aa13.21□□□□□ -0.29
EIF3F-201ENST00000309828 DHCR7Q9UBM7 475 aaKnown RBP13.21□□□□□ -0.29
EIF3F-201ENST00000309828 DNAJB9Q9UBS3 223 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms