RNA–Protein interactions for RNA: ENST00000309546.7

LIME1-201, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIME1, Length 1,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-201ENST00000309546 FUT7Q11130 342 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 RPS6KA2Q15349 733 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 NTRK2Q16620 822 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 UNC50Q53HI1 259 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 WLSQ5T9L3 541 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 SLC48A1Q6P1K1 146 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 TIFABQ6ZNK6 161 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 PRR22Q8IZ63 422 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 C1orf52Q8N6N3 182 aaKnown RBP17.95■□□□□ 0.46
LIME1-201ENST00000309546 MYRIPQ8NFW9 859 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 LURAP1Q96LR2 239 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 TMEM237Q96Q45 408 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 UCK2Q9BZX2 261 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 SLC6A15Q9H2J7 730 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 NMRK1Q9NWW6 199 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 SPRR3Q9UBC9 169 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 B4GALT7Q9UBV7 327 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 ZNF225Q9UK10 706 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 FREM3P0C091 2139 aa17.95■□□□□ 0.46
LIME1-201ENST00000309546 APCP25054 2843 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 CAPN14A8MX76 684 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 TP53I11O14683 189 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 SUSD5O60279 629 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 HCN1O60741 890 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 ENDOUP21128 410 aaKnown RBP17.94■□□□□ 0.46
LIME1-201ENST00000309546 SSTR2P30874 369 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 FEN1P39748 380 aaKnown RBP17.94■□□□□ 0.46
LIME1-201ENST00000309546 NRG3P56975 720 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 RASA2Q15283 850 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 NNATQ16517 81 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 ZNF678Q5SXM1 525 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 B3GNT6Q6ZMB0 384 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 GSPT2Q8IYD1 628 aaKnown RBP17.94■□□□□ 0.46
LIME1-201ENST00000309546 VWA5B2Q8N398 1253 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 LIX1Q8N485 282 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 ZNF615Q8N8J6 731 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 CHTF18Q8WVB6 975 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 TP53INP1Q96A56 240 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 KLHL29Q96CT2 875 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 ZNF597Q96LX8 424 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 SPOCK3Q9BQ16 436 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 PROK2Q9HC23 129 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 BCAP29Q9UHQ4 241 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 NPFFR2Q9Y5X5 522 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 FBN2P35556 2912 aa17.94■□□□□ 0.46
LIME1-201ENST00000309546 MANBAO00462 879 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 DLX3O60479 287 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 ESRRBO95718 433 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 KRT6AP02538 564 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 KRT6BP04259 564 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 FAM153BP0C7A2 387 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 KRT15P19012 456 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 ATP5F1P24539 256 aaPredicted RBP17.93■□□□□ 0.46
LIME1-201ENST00000309546 GDF1P27539 372 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 HMOX2P30519 316 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 KRT6CP48668 564 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 TRPC1P48995 793 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 TMED10P49755 219 aaKnown RBP17.93■□□□□ 0.46
LIME1-201ENST00000309546 FAM153CQ494X1 144 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 TBCELQ5QJ74 424 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 TMEM198Q66K66 360 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 BICRALQ6AI39 1079 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 FAM180BQ6P0A1 224 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 FAM111BQ6SJ93 734 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 GPRIN3Q6ZVF9 776 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 LRRC25Q8N386 305 aaPredicted RBP17.93■□□□□ 0.46
LIME1-201ENST00000309546 OR7G1Q8NGA0 311 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 LILRB4Q8NHJ6 448 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 ADIPOR1Q96A54 375 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 TM4SF18Q96CE8 201 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 TTYH2Q9BSA4 534 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 FAIM2Q9BWQ8 316 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 ENKD1Q9H0I2 346 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 KCNJ16Q9NPI9 418 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 RYDENQ9NUL5 291 aaKnown RBP17.93■□□□□ 0.46
LIME1-201ENST00000309546 PSMC3IPQ9P2W1 217 aaPredicted RBP17.93■□□□□ 0.46
LIME1-201ENST00000309546 TBK1Q9UHD2 729 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 CES1P1Q9UKY3 287 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 FAM215AQ9Y5M1 114 aa17.93■□□□□ 0.46
LIME1-201ENST00000309546 ARHGAP21Q5T5U3 1957 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 INTS1Q8N201 2190 aaKnown RBP17.92■□□□□ 0.46
LIME1-201ENST00000309546 WDR1O75083 606 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 CHN1P15882 459 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 GPX3P22352 226 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 MASP1P48740 699 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 CSTF3Q12996 717 aaKnown RBP17.92■□□□□ 0.46
LIME1-201ENST00000309546 SLC29A2Q14542 456 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 EXOSC7Q15024 291 aaKnown RBP17.92■□□□□ 0.46
LIME1-201ENST00000309546 C1orf185Q5T7R7 199 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 LCA5Q86VQ0 697 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 ADCY4Q8NFM4 1077 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 METTL6Q8TCB7 284 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 SPPL2AQ8TCT8 520 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 RILPQ96NA2 401 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 ZNF382Q96SR6 550 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 PFDN4Q9NQP4 134 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 MAT2BQ9NZL9 334 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 VPS29Q9UBQ0 182 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 PSME2Q9UL46 239 aa17.92■□□□□ 0.46
LIME1-201ENST00000309546 DTX4Q9Y2E6 619 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms