RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 CLEC4FQ8N1N0 589 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CENPSQ8N2Z9 138 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ZCCHC7Q8N3Z6 543 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 RYBPQ8N488 228 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF557Q8N988 423 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 FNDC5Q8NAU1 212 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CHDHQ8NE62 594 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF548Q8NEK5 533 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ABHD11Q8NFV4 315 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 OR2T12Q8NG77 320 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 OR13C4Q8NGS5 318 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 FAM110BQ8TC76 370 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 METTL6Q8TCB7 284 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CD200R1Q8TD46 325 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 BLOC1S5Q8TDH9 187 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 UBTD2Q8WUN7 234 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 GTF2H4Q92759 462 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 EFHD2Q96C19 240 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SH3YL1Q96HL8 342 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TEX37Q96LM6 180 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CCDC138Q96M89 665 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 DACH2Q96NX9 599 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 KCNA7Q96RP8 456 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 NODALQ96S42 347 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SEPHS2Q99611 448 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 GPR21Q99679 349 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 DCUN1D5Q9BTE7 237 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 NTMT1Q9BV86 223 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ADGRE3Q9BY15 652 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SLC29A3Q9BZD2 475 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 DPH1Q9BZG8 443 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 LHPPQ9H008 270 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CLPBQ9H078 707 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 GABARAPL1Q9H0R8 117 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 EPS8L2Q9H6S3 715 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CCNB1IP1Q9NPC3 277 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 SEMA4BQ9NPR2 832 aaPredicted RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 FBXO8Q9NRD0 319 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 DCAF13Q9NV06 445 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CD274Q9NZQ7 290 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 GALPQ9UBC7 116 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TRPS1Q9UHF7 1281 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 VPS51Q9UID3 782 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ENPP5Q9UJA9 477 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 EIF3LQ9Y262 564 aaKnown RBP4.65□□□□□ -1.67
CKS1B-201ENST00000308987 HS3ST2Q9Y278 367 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 BTRCQ9Y297 605 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 MAN2B2Q9Y2E5 1009 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 DHRS7Q9Y394 339 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TPRKBQ9Y3C4 175 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 TIMM22Q9Y584 194 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ORC6Q9Y5N6 252 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ARL5AQ9Y689 179 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ATP23Q9Y6H3 246 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 A3GALT2U3KPV4 340 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 POLQO75417 2590 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CSMD2Q7Z408 3487 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 CCDC88CQ9P219 2028 aa4.65□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF106Q9H2Y7 1883 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 APCP25054 2843 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ANKRD17O75179 2603 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 DIDO1Q9BTC0 2240 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 A0A096LPI6 279 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TRBV5-3A0A0A0MS03 114 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 LOC100130705A0A1B0GUX0 176 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 UBA6A0AVT1 1052 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ELOVL7A1L3X0 281 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ISPDA4D126 451 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF99A8MXY4 864 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 FAM220BPB1ANY3 271 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 F5H5T6 163 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 K7EPI3 171 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 EIF3FO00303 357 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 SLC1A7O00341 560 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 BTN3A1O00481 513 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 KPNA3O00505 521 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CXCR6O00574 342 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 NTN3O00634 580 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PRMT5O14744 637 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 MAGEB3O15480 346 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 INSIG1O15503 277 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 KDELR3O43731 214 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ATP6V1G1O75348 118 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 BCAS1O75363 584 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CLDN11O75508 207 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 RSL1D1O76021 490 aaKnown RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PRKD3O94806 890 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 OR4F21O95013 312 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 TNFSF15O95150 251 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PCDH8O95206 1070 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PAK4O96013 591 aaPredicted RBP4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CST1P01037 141 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PRLP01236 227 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 CSF2P04141 144 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 EBLN1P0CF75 366 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 PRPS2P11908 318 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 NCK1P16333 377 aa4.64□□□□□ -1.67
CKS1B-201ENST00000308987 ZNF182P17025 639 aaPredicted RBP4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms