RNA–Protein interactions for RNA: ENST00000308588.9

SNUPN-201, Transcript of snurportin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNUPN, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNUPN-201ENST00000308588 TMEM198Q66K66 360 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 RNF111Q6ZNA4 994 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 C16orf47Q6ZP98 133 aaPredicted RBP20.53■□□□□ 0.88
SNUPN-201ENST00000308588 FAM9CQ8IZT9 166 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 BEST3Q8N1M1 668 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 OR7G1Q8NGA0 311 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 TM9SF4Q92544 642 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 KAT2AQ92830 837 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 COQ8BQ96D53 544 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 THOC1Q96FV9 657 aaKnown RBP20.53■□□□□ 0.88
SNUPN-201ENST00000308588 OR10A5Q9H207 317 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 MYOTQ9UBF9 498 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 CSAG2Q9Y5P2 127 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 GPR45Q9Y5Y3 372 aa20.53■□□□□ 0.88
SNUPN-201ENST00000308588 DPM1O60762 260 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 WDPCPO95876 746 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 CBX7O95931 251 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 ST13P50502 369 aaKnown RBP20.52■□□□□ 0.87
SNUPN-201ENST00000308588 DUSP8Q13202 625 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 EXOSC7Q15024 291 aaKnown RBP20.52■□□□□ 0.87
SNUPN-201ENST00000308588 CPTPQ5TA50 214 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 HAS2Q92819 552 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 DPY30Q9C005 99 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 ANKRA2Q9H9E1 313 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 TCF7L2Q9NQB0 619 aa20.52■□□□□ 0.87
SNUPN-201ENST00000308588 SDAD1Q9NVU7 687 aaKnown RBP eCLIP20.52■□□□□ 0.87
SNUPN-201ENST00000308588 SMG1Q96Q15 3661 aaKnown RBP20.51■□□□□ 0.87
SNUPN-201ENST00000308588 OR6C76A6NM76 312 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 ACAD11Q709F0 780 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 ZNF551Q7Z340 670 aaPredicted RBP20.51■□□□□ 0.87
SNUPN-201ENST00000308588 CAMKMTQ7Z624 323 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 PTRH1Q86Y79 214 aaKnown RBP20.51■□□□□ 0.87
SNUPN-201ENST00000308588 ZADH2Q8N4Q0 377 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 OR7G2Q8NG99 324 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 OR5L2Q8NGL0 311 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 RFWD2Q8NHY2 731 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 NUBPLQ8TB37 319 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 TEX37Q96LM6 180 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 PRPF18Q99633 342 aaKnown RBP20.51■□□□□ 0.87
SNUPN-201ENST00000308588 RNF32Q9H0A6 362 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 ACSS1Q9NUB1 689 aaPredicted RBP20.51■□□□□ 0.87
SNUPN-201ENST00000308588 MAPRE3Q9UPY8 281 aa20.51■□□□□ 0.87
SNUPN-201ENST00000308588 PLOD3O60568 738 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 ITGA10O75578 1167 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 F10P00742 488 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 PRB1P04280 392 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 DDX5P17844 614 aaKnown RBP20.5■□□□□ 0.87
SNUPN-201ENST00000308588 UFM1P61960 85 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 NFATC3Q12968 1075 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 EBPQ15125 230 aaKnown RBP20.5■□□□□ 0.87
SNUPN-201ENST00000308588 FHL5Q5TD97 284 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 OR52R1Q8NGF1 315 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 C16orf52Q8NHV5 167 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 ERP27Q96DN0 273 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 ZBED6CLQ96FA7 236 aaPredicted RBP20.5■□□□□ 0.87
SNUPN-201ENST00000308588 MARK4Q96L34 752 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 CCDC28BQ9BUN5 200 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 NPHS2Q9NP85 383 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 ATAD3AQ9NVI7 634 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 FGFR1OP2Q9NVK5 253 aa20.5■□□□□ 0.87
SNUPN-201ENST00000308588 DYTNA2CJ06 578 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 WWP2O00308 870 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 PLOD2O00469 737 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 UBDO15205 165 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 POLR3GO15318 223 aaPredicted RBP20.49■□□□□ 0.87
SNUPN-201ENST00000308588 OR2J2O76002 312 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 VIMP08670 466 aaKnown RBP20.49■□□□□ 0.87
SNUPN-201ENST00000308588 IDO1P14902 403 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 EFNA1P20827 205 aaPredicted RBP20.49■□□□□ 0.87
SNUPN-201ENST00000308588 MANFP55145 182 aaKnown RBP20.49■□□□□ 0.87
SNUPN-201ENST00000308588 NME5P56597 212 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 HSPB3Q12988 150 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 NADK2Q4G0N4 442 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 ZNF468Q5VIY5 522 aaPredicted RBP20.49■□□□□ 0.87
SNUPN-201ENST00000308588 SLC29A4Q7RTT9 530 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 CATSPER1Q8NEC5 780 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 STON2Q8WXE9 905 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 MFRPQ9BY79 579 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 BHLHE41Q9C0J9 482 aaPredicted RBP20.49■□□□□ 0.87
SNUPN-201ENST00000308588 WWTR1Q9GZV5 400 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 ABI3Q9P2A4 366 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 BCAP29Q9UHQ4 241 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 DCTN4Q9UJW0 460 aa20.49■□□□□ 0.87
SNUPN-201ENST00000308588 YARS2Q9Y2Z4 477 aaKnown RBP20.49■□□□□ 0.87
SNUPN-201ENST00000308588 A0A087WV62 115 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 ZNF354AO60765 605 aaPredicted RBP20.48■□□□□ 0.87
SNUPN-201ENST00000308588 SLITRK5O94991 958 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 MC3RP41968 323 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 EMDP50402 254 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 ARG2P78540 354 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 TUBA3CQ13748 450 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 MLC1Q15049 377 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 GSTA3Q16772 222 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 PGS1Q32NB8 556 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 CGB2Q6NT52 195 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 TUBA3EQ6PEY2 450 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 TMEM107Q6UX40 140 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 Q6ZS92 163 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 NATD1Q8N6N6 113 aa20.48■□□□□ 0.87
SNUPN-201ENST00000308588 TEX19Q8NA77 164 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms