RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 GIMD1P0DJR0 217 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PTGER1P34995 402 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 MC3RP41968 323 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 SIM1P81133 766 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 LTB4RQ15722 352 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 RPS26P11Q5JNZ5 115 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 PMS2CLQ68D20 193 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 UNQ6494/PRO21346Q6UXR6 183 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 CEP68Q76N32 757 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 LGI4Q8N135 537 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 ARL10Q8N8L6 244 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 SPPL2AQ8TCT8 520 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 APOBEC4Q8WW27 367 aaKnown RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 CYGBQ8WWM9 190 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 EPYCQ99645 322 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 REEP1Q9H902 201 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 C3orf14Q9HBI5 128 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 SEMA4GQ9NTN9 838 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 NDUFAF4Q9P032 175 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 TMEFF2Q9UIK5 374 aaPredicted RBP11.17□□□□□ -0.62
TRIM40-205ENST00000307859 RNF215Q9Y6U7 377 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 U3KQV3 271 aa11.17□□□□□ -0.62
TRIM40-205ENST00000307859 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 DPPA5A6NC42 116 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 PRAMEF25A6NGN4 478 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 RHPN2P1A8MT19 583 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 ASNA1O43681 348 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 NUDT21O43809 227 aaKnown RBP11.16□□□□□ -0.62
TRIM40-205ENST00000307859 MFN2O95140 757 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 RECKO95980 971 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 HMGN2P05204 90 aaKnown RBP11.16□□□□□ -0.62
TRIM40-205ENST00000307859 CTSBP07858 339 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 IFI6P09912 130 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 OR12D1P0DN82 309 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 CPMP14384 443 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 CD247P20963 164 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 XKP51811 444 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 GFERP55789 205 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 RAB38P57729 211 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 BNC1Q01954 994 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 FUT5Q11128 374 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 PPP1R8Q12972 351 aaKnown RBP11.16□□□□□ -0.62
TRIM40-205ENST00000307859 LASP1Q14847 261 aaKnown RBP11.16□□□□□ -0.62
TRIM40-205ENST00000307859 SHBQ15464 509 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 RFX4Q33E94 735 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 LYSMD4Q5XG99 296 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 KRT80Q6KB66 452 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 FAM92BQ6ZTR7 304 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 SZRD1Q7Z422 152 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 SLC25A45Q8N413 288 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 NUP43Q8NFH3 380 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 OR5T3Q8NGG3 340 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 OR5D16Q8NGK9 328 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 GIMAP5Q96F15 307 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 FBXL20Q96IG2 436 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF300Q96RE9 604 aaPredicted RBP11.16□□□□□ -0.62
TRIM40-205ENST00000307859 ZNF347Q96SE7 839 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 MBOAT4Q96T53 435 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 EPB41L1Q9H4G0 881 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 BCL2L10Q9HD36 194 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 STARD5Q9NSY2 213 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 TRPC4Q9UBN4 977 aa11.16□□□□□ -0.62
TRIM40-205ENST00000307859 SAMHD1Q9Y3Z3 626 aaKnown RBP11.16□□□□□ -0.62
TRIM40-205ENST00000307859 CNOT1A5YKK6 2376 aaKnown RBP11.15□□□□□ -0.62
TRIM40-205ENST00000307859 TMEM247A6NEH6 219 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 TM4SF5O14894 197 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 ADAMDEC1O15204 470 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 SLC28A2O43868 658 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 KIF1CO43896 1103 aaKnown RBP11.15□□□□□ -0.62
TRIM40-205ENST00000307859 H6PDO95479 791 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 ITGA2P17301 1181 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 TNFRSF1BP20333 461 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 PRKACGP22612 351 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 PPP2R1BP30154 601 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 MAN2A2P49641 1150 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 ARHGDIAP52565 204 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 BNIP3Q12983 259 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 APOFQ13790 326 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 NR1D2Q14995 579 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 SYPL1Q16563 259 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 INAVAQ3KP66 663 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 PRAMEF8Q5VWM4 474 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 PRAMEF7Q5VXH5 474 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 ANKRD34AQ69YU3 496 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 NIPAL1Q6NVV3 410 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 C11orf74Q86VG3 221 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 APLFQ8IW19 511 aaPredicted RBP11.15□□□□□ -0.62
TRIM40-205ENST00000307859 SLC35F3Q8IY50 421 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 CARFQ8N187 725 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 TMEM52Q8NDY8 209 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 OR7G2Q8NG99 324 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 GPR32P1Q8NGA4 272 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 BBS10Q8TAM1 723 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 GAB3Q8WWW8 586 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 TANKQ92844 425 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 MAGED4Q96JG8 741 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 TGM7Q96PF1 710 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 MS4A4EQ96PG1 132 aa11.15□□□□□ -0.62
TRIM40-205ENST00000307859 ELF4Q99607 663 aaPredicted RBP11.15□□□□□ -0.62
TRIM40-205ENST00000307859 BARD1Q99728 777 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms