RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 C16orf58Q96GQ5 468 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 SULT4A1Q9BR01 284 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 HRH4Q9H3N8 390 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 HRASLS2Q9NWW9 162 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ZIM2Q9NZV7 527 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 SEC14L4Q9UDX3 406 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 SNRNP70P08621 437 aaKnown RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 OR8U9P0C7N5 309 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 RSU1Q15404 277 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 C15orf52Q6ZUT6 534 aaKnown RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 PLEKHA3Q9HB20 300 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 CA14Q9ULX7 337 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 UBE2J1Q9Y385 318 aaPredicted RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 SPATA31A6Q5VVP1 1343 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 KDM4FA0A1W2PPD8 638 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 LCHNA4D1U4 455 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 DCNP07585 359 aaKnown RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 SLC6A6P31641 620 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 TSPAN33Q86UF1 283 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 PQLC3Q8N755 202 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 COG8Q96MW5 612 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 NIFKQ9BYG3 293 aaKnown RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 HCN4Q9Y3Q4 1203 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 CHRNA1P02708 482 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 PPP5CP53041 499 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 BTN1A1Q13410 526 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ERV3-1Q14264 604 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 GRIN2CQ14957 1233 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ALG10BQ5I7T1 473 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 FAM160A2Q8N612 972 aaPredicted RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 OR51T1Q8NGJ9 327 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 OR2A12Q8NGT7 310 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 RPLP0P6Q8NHW5 317 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ZMYND19Q96E35 227 aaPredicted RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 ABCG5Q9H222 651 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 CD320Q9NPF0 282 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 BCL9O00512 1426 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ARGFXA6NJG6 315 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 GABRDO14764 452 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 GPR39O43194 453 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 HTR3BO95264 441 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 CSTAP01040 98 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 EPCAMP16422 314 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 FPR1P21462 350 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 YBEYP58557 167 aaPredicted RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 SDR9C7Q8NEX9 313 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 C16orf78Q8WTQ4 265 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ST8SIA2Q92186 375 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 NEDD4LQ96PU5 975 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 OPA3Q9H6K4 179 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 CWH43Q9H720 699 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 NUDT21O43809 227 aaKnown RBP12.07□□□□□ -0.48
USP38-201ENST00000307017 FOXA1P55317 472 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 PTPRRQ15256 657 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 OR52W1Q6IF63 320 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 PLEKHG7Q6ZR37 379 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 TCEAL4Q96EI5 215 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 COPS3Q9UNS2 423 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 ADAMTS13Q76LX8 1427 aa12.07□□□□□ -0.48
USP38-201ENST00000307017 VIRMAQ69YN4 1812 aaKnown RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 SOCS6O14544 535 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 CD3GP09693 182 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 CAPN3P20807 821 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PIK3CBP42338 1070 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 ANKRD13BQ86YJ7 626 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 C2CD4AQ8NCU7 369 aaPredicted RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 OR56A3Q8NH54 315 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 IGSF8Q969P0 613 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PTCHD1Q96NR3 888 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 HAPLN3Q96S86 360 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PCBD2Q9H0N5 130 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 MTG2Q9H4K7 406 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 RNF215Q9Y6U7 377 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 H0YGN5 161 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 CRTAPO75718 401 aaPredicted RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 CASRP41180 1078 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 GCGRP47871 477 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 TUBA1BP68363 451 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 POU6F2P78424 691 aaPredicted RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 C6orf132Q5T0Z8 1188 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 ADGRF1Q5T601 910 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 TUBA1AQ71U36 451 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 MFSD6LQ8IWD5 586 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 ACBD4Q8NC06 268 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 OR9A1PQ8NGU1 263 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 SAMD8Q96LT4 415 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 SMIM14Q96QK8 99 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 USP22Q9UPT9 525 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 SCAF4O95104 1147 aaKnown RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 CAV2P51636 162 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 C6orf141Q5SZD1 244 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 ZNF529Q6P280 563 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 UNQ6126/PRO20091Q6UXV3 157 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 ZNF367Q7RTV3 350 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 LILRB2Q8N423 598 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PLEKHO2Q8TD55 490 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 ELP5Q8TE02 316 aa12.06□□□□□ -0.48
USP38-201ENST00000307017 PELOQ9BRX2 385 aaKnown RBP12.06□□□□□ -0.48
USP38-201ENST00000307017 RXFP3Q9NSD7 469 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms