RNA–Protein interactions for RNA: ENST00000306324.3

HOXD4-201, Transcript of homeobox D4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXD4, Length 1,464 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD4-201ENST00000306324 ISLR2Q6UXK2 745 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 MIER2Q8N344 545 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 C9orf43Q8TAL5 461 aaPredicted RBP20.76■□□□□ 0.91
HOXD4-201ENST00000306324 STON2Q8WXE9 905 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 CTHRC1Q96CG8 243 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 ZBTB18Q99592 522 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 SMAD5Q99717 465 aaKnown RBP20.76■□□□□ 0.91
HOXD4-201ENST00000306324 BHLHE41Q9C0J9 482 aaPredicted RBP20.76■□□□□ 0.91
HOXD4-201ENST00000306324 OR10A5Q9H207 317 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 CDCP1Q9H5V8 836 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 ANKRA2Q9H9E1 313 aa20.76■□□□□ 0.91
HOXD4-201ENST00000306324 ZNF71Q9NQZ8 489 aaPredicted RBP20.76■□□□□ 0.91
HOXD4-201ENST00000306324 K7EM74 188 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SOX18P35713 384 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SOX11P35716 441 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ARFIP2P53365 341 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SLC37A1P57057 533 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 RNF4P78317 190 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SRSF11Q05519 484 aaKnown RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ABHD17BQ5VST6 288 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 OR4F3Q6IEY1 312 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 TCTN3Q6NUS6 607 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 TMEM107Q6UX40 140 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 CAMKMTQ7Z624 323 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 RPS19BP1Q86WX3 136 aaKnown RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 NATD1Q8N6N6 113 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 TESCQ96BS2 214 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ZNF354BQ96LW1 612 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 UBL7Q96S82 380 aaPredicted RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 CLMPQ9H6B4 373 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 LIN28AQ9H9Z2 209 aaKnown RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ZBTB20Q9HC78 741 aaPredicted RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SDR39U1Q9NRG7 319 aaPredicted RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ACSS1Q9NUB1 689 aaPredicted RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 TLN1Q9Y490 2541 aaKnown RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 A0A1W2PRB8 838 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 MAN1A2O60476 641 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SLC22A3O75751 556 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 PDGFAP04085 211 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 CLPSP04118 112 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 NCF2P19878 526 aaPredicted RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 S1PR1P21453 382 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 MC3RP41968 323 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 FRKP42685 505 aaPredicted RBP20.75■□□□□ 0.91
HOXD4-201ENST00000306324 KIR3DL1P43629 444 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 MEP1AQ16819 746 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 DPY19L1Q2PZI1 675 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 FAM174BQ3ZCQ3 159 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SPANXN4Q5MJ08 99 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ACER2Q5QJU3 275 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SLC29A4Q7RTT9 530 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 C9orf40Q8IXQ3 194 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 SIMC1Q8NDZ2 872 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 OR7G2Q8NG99 324 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 OR7G1Q8NGA0 311 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 OR52R1Q8NGF1 315 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 WBP1Q96G27 269 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 MAGED4Q96JG8 741 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 GAL3ST4Q96RP7 486 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 NPAS2Q99743 824 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 FAM107BQ9H098 131 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 EPS8L2Q9H6S3 715 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 STMN3Q9NZ72 180 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 KLHL14Q9P2G3 628 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ZNF639Q9UID6 485 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 TRIM33Q9UPN9 1127 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 ZNF451Q9Y4E5 1061 aa20.75■□□□□ 0.91
HOXD4-201ENST00000306324 CBX7O95931 251 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 IL12AP29459 219 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 ST13P50502 369 aaKnown RBP20.74■□□□□ 0.91
HOXD4-201ENST00000306324 MFAP5Q13361 173 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 LACTB2Q53H82 288 aaPredicted RBP20.74■□□□□ 0.91
HOXD4-201ENST00000306324 PAOXQ6QHF9 649 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 ASB18Q6ZVZ8 466 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 ZNF615Q8N8J6 731 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 OR8J2Q8NGG1 315 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 OR5L2Q8NGL0 311 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 OR8K3Q8NH51 312 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 ZIM2Q9NZV7 527 aa20.74■□□□□ 0.91
HOXD4-201ENST00000306324 COPG1Q9Y678 874 aaKnown RBP20.74■□□□□ 0.91
HOXD4-201ENST00000306324 BSNQ9UPA5 3926 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 GMNCA6NCL1 334 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 OR6C76A6NM76 312 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 CFLARO15519 480 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 PLOD3O60568 738 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 PRAMEF2O60811 474 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 SLITRK5O94991 958 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 SFTPCP11686 197 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 S100A3P33764 101 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 CDK9P50750 372 aaKnown RBP20.73■□□□□ 0.91
HOXD4-201ENST00000306324 DGKQP52824 942 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 C16orf47Q6ZP98 133 aaPredicted RBP20.73■□□□□ 0.91
HOXD4-201ENST00000306324 GLB1L3Q8NCI6 653 aaPredicted RBP20.73■□□□□ 0.91
HOXD4-201ENST00000306324 OR9I1Q8NGQ6 314 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 C16orf52Q8NHV5 167 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 ERP27Q96DN0 273 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 ELP4Q96EB1 424 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 DDX18Q9NVP1 670 aaKnown RBP20.73■□□□□ 0.91
HOXD4-201ENST00000306324 PCDHGB7Q9Y5F8 929 aa20.73■□□□□ 0.91
HOXD4-201ENST00000306324 TMEM200CA6NKL6 621 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms