RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 GIFP27352 417 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 STAT5AP42229 794 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 GIPRP48546 466 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 TEKQ02763 1124 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 MTAPQ13126 283 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 KRT78Q8N1N4 520 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 L3MBTL4Q8NA19 623 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 LSM14AQ8ND56 463 aaKnown RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 BTN2A2Q8WVV5 523 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 FUZQ9BT04 418 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 OR51V1Q9H2C8 321 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 ZCCHC3Q9NUD5 404 aaKnown RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 MRPL15Q9P015 296 aaKnown RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 IL20RAQ9UHF4 553 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 COL4A5P29400 1685 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 CD3GP09693 182 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 BMP7P18075 431 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 POU3F3P20264 500 aaPredicted RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 XCR1P46094 333 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 MAP4K2Q12851 820 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 ILKQ13418 452 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 GRB14Q14449 540 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 NDUFA9Q16795 377 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 ADNP2Q6IQ32 1131 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 LINGO2Q7L985 606 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 ZNF655Q8N720 491 aaPredicted RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 A0A0X1KG70 313 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 A0A1W2PPK0 400 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 SMAD6O43541 496 aaKnown RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 PRKYO43930 277 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 ZNF623O75123 536 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 DUSP11O75319 330 aaKnown RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 SLC16A8O95907 504 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 FGBP02675 491 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 HRGP04196 525 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 PIPP12273 146 aaPredicted RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 ZNF250P15622 560 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 CR2P20023 1033 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 SGSHP51688 502 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 SNTB2Q13425 540 aaKnown RBP12.38□□□□□ -0.43
TRIM35-201ENST00000305364 GGTA1PQ4G0N0 100 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 CHST9Q7L1S5 443 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 CFAP206Q8IYR0 622 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 ANKK1Q8NFD2 765 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 OR52L1Q8NGH7 329 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 CDCP1Q9H5V8 836 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 THSD1Q9NS62 852 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 NEUROG3Q9Y4Z2 214 aa12.38□□□□□ -0.43
TRIM35-201ENST00000305364 A0A0G2JMP0 313 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 CPSF4LA6NMK7 179 aaKnown RBP12.37□□□□□ -0.43
TRIM35-201ENST00000305364 PITPNM1O00562 1244 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 GPR37L1O60883 481 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 ATG13O75143 517 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 STC2O76061 302 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 PLATP00750 562 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 APOC3P02656 99 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 HSD3B1P14060 373 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 GSTM3P21266 225 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 HSD3B2P26439 372 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 RFX3P48380 749 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 CLDN20P56880 219 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 VRK3Q8IV63 474 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 SLITRK4Q8IW52 837 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 ZNF433Q8N7K0 673 aaPredicted RBP12.37□□□□□ -0.43
TRIM35-201ENST00000305364 OR4M2Q8NGB6 313 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 PIGXQ8TBF5 258 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 ASB11Q8WXH4 323 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 UPRTQ96BW1 309 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 TRMT61AQ96FX7 289 aaKnown RBP12.37□□□□□ -0.43
TRIM35-201ENST00000305364 TMEM43Q9BTV4 400 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 BRD7Q9NPI1 651 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 UBE2QL1A1L167 161 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 LRRTM2O43300 516 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 RLN1P04808 185 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 WNT3P56703 355 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 SP140Q13342 867 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 GRK1Q15835 563 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 SFRP4Q6FHJ7 346 aaPredicted RBP12.37□□□□□ -0.43
TRIM35-201ENST00000305364 ABI3BPQ7Z7G0 1075 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 ZNF683Q8IZ20 524 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 TMEM163Q8TC26 289 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 GINS4Q9BRT9 223 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 MIXL1Q9H2W2 232 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 KRCC1Q9NPI7 259 aaPredicted RBP12.37□□□□□ -0.43
TRIM35-201ENST00000305364 C5AR2Q9P296 337 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 AP1M2Q9Y6Q5 423 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 LOC105371267A0A1B0GV96 52 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 NPIPB15A6NHN6 443 aaPredicted RBP12.37□□□□□ -0.43
TRIM35-201ENST00000305364 TEX46H3BTG2 121 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 OAZ2O95190 189 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 FCER2P06734 321 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 UQCRC2P22695 453 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 PTPN6P29350 595 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 GPR176Q14439 515 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 COL28A1Q2UY09 1125 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 SLC24A5Q71RS6 500 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 SLC43A3Q8NBI5 491 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 DBF4BQ8NFT6 615 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 OR4F15Q8NGB8 312 aa12.37□□□□□ -0.43
TRIM35-201ENST00000305364 SLC35G5Q96KT7 338 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms