RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 LSAMPQ13449 338 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 CSNK1A1LQ8N752 337 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 ASCC1Q8N9N2 400 aaKnown RBP13.3□□□□□ -0.28
PRKCB-201ENST00000303531 OR52N2Q8NGI0 321 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 HS6ST2Q96MM7 605 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 EPHA6Q9UF33 1036 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 PRKCAP17252 672 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 ERP29P30040 261 aaKnown RBP13.3□□□□□ -0.28
PRKCB-201ENST00000303531 POU4F2Q12837 409 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 MANEALQ5VSG8 457 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 FIP1L1Q6UN15 594 aaKnown RBP13.3□□□□□ -0.28
PRKCB-201ENST00000303531 SLC5A8Q8N695 610 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 PGAP3Q96FM1 320 aaPredicted RBP13.3□□□□□ -0.28
PRKCB-201ENST00000303531 FAM46AQ96IP4 442 aaKnown RBP13.3□□□□□ -0.28
PRKCB-201ENST00000303531 LHPPQ9H008 270 aa13.3□□□□□ -0.28
PRKCB-201ENST00000303531 ETV4P43268 484 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 PLCXD2Q0VAA5 305 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 DHCR24Q15392 516 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 COMMD6Q7Z4G1 85 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 TEX26Q8N6G2 289 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ECHDC3Q96DC8 303 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 RAD9AQ99638 391 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 GSTO2Q9H4Y5 243 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 PCDHB16Q9NRJ7 776 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 CLEC4EQ9ULY5 219 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 SH3PXD2BA1X283 911 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 FAM221BA6H8Z2 402 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ADORA3P0DMS8 318 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ANXA3P12429 323 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 NFATC3Q12968 1075 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ANKRD13BQ86YJ7 626 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ACBD7Q8N6N7 88 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 TMIEQ8NEW7 156 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 SGTBQ96EQ0 304 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 BOLA2-SMG1P6H3BVE0 249 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 RBMXP38159 391 aaKnown RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ACTA2P62736 377 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ACTG2P63267 376 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 COL9A2Q14055 689 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 PAGE3Q5JUK9 113 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 KIAA0319Q5VV43 1072 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 FAM180BQ6P0A1 224 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 TTC9BQ8N6N2 239 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 TESCQ96BS2 214 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 SLC6A7Q99884 636 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 BACE2Q9Y5Z0 518 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 PORP16435 677 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 BMXP51813 675 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 C1orf61Q13536 156 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 CDKL4Q5MAI5 379 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 LRRTM3Q86VH5 581 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 RXFP3Q9NSD7 469 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 FRKP42685 505 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ZNF551Q7Z340 670 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 THAP3Q8WTV1 239 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 SLC12A9Q9BXP2 914 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 SDR39U1Q9NRG7 319 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 GXYLT2A0PJZ3 443 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 SLC33A1O00400 549 aaPredicted RBP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 CDC40O60508 579 aaKnown RBP eCLIP13.29□□□□□ -0.28
PRKCB-201ENST00000303531 SNAPC5O75971 98 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 CSF2RAP15509 400 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 FOXA1P55317 472 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 WDR45BQ5MNZ6 344 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 PROKR1Q8TCW9 393 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ABCG5Q9H222 651 aa13.29□□□□□ -0.28
PRKCB-201ENST00000303531 ZNF865P0CJ78 1059 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 IL7P13232 177 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ARHGAP11AQ6P4F7 1023 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 PRSS48Q7RTY5 328 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CNN2Q99439 309 aaKnown RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 RANBP3Q9H6Z4 567 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ARMC1Q9NVT9 282 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 HEPACAM2A8MVW5 462 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 TOXO94900 526 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 SLC16A8O95907 504 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ADAP00813 363 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 HNRNPA1P09651 372 aaKnown RBP eCLIP13.28□□□□□ -0.282e-6■■□□□ 14.5
PRKCB-201ENST00000303531 H2AFB2P0C5Z0 115 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CHRFAM7AQ494W8 412 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 RNF111Q6ZNA4 994 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 TTLL10Q6ZVT0 673 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CD200R1Q8TD46 325 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 TGM7Q96PF1 710 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 SORT1Q99523 831 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CITO14578 2027 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 RNH1P13489 461 aaKnown RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 CNR2P34972 360 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ARF3P61204 181 aaPredicted RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 ARF1P84077 181 aaKnown RBP13.28□□□□□ -0.28
PRKCB-201ENST00000303531 SGCAQ16586 387 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 LRIF1Q5T3J3 769 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 GRHL2Q6ISB3 625 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 FAM217AQ8IXS0 508 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 FZD3Q9NPG1 666 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 TMEM14AQ9Y6G1 99 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 T-ENOLP0DO92 83 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 DPP6P42658 865 aa13.28□□□□□ -0.28
PRKCB-201ENST00000303531 MTNR1AP48039 350 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms