RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 HIPK4Q8NE63 616 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 NUP43Q8NFH3 380 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 MIPOL1Q8TD10 442 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 RBM18Q96H35 190 aaKnown RBP23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 MAGED4Q96JG8 741 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 PTCHD1Q96NR3 888 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 CXorf21Q9HAI6 301 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 CTSFQ9UBX1 484 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 ZNF639Q9UID6 485 aa23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 C19orf53Q9UNZ5 99 aaPredicted RBP23.04■■□□□ 1.28
GTF2A1-201ENST00000298173 A0A1W2PNU3 283 aaPredicted RBP23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 TCRBV3S1A0A5B6 114 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 HMGN2P05204 90 aaKnown RBP23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 CT62P0C5K7 136 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 RAB15P59190 212 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 VEZF1Q14119 521 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 LCN10Q6JVE6 187 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 SPPL2CQ8IUH8 684 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 HORMAD2Q8N7B1 307 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 SIMC1Q8NDZ2 872 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 PLPP5Q8NEB5 264 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 C7orf57Q8NEG2 295 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 OR52E4Q8NGH9 312 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 STT3BQ8TCJ2 826 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 ASPSCR1Q9BZE9 553 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 B3GALT1Q9Y5Z6 326 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 VSTM2BA6NLU5 285 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 AQP12BA6NM10 295 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 SLC34A2O95436 690 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 PSMG1O95456 288 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 ATXN8OSP0DMR3 200 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 S1PR1P21453 382 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 RPS26P62854 115 aaKnown RBP23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 RHDQ02161 417 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 NHLH1Q02575 133 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 EEF1A2Q05639 463 aaKnown RBP23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 EIF3IQ13347 325 aaKnown RBP23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 DCAF12Q5T6F0 453 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 ZNF517Q6ZMY9 492 aaPredicted RBP23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 AQP12AQ8IXF9 295 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 SLC26A1Q9H2B4 701 aa23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 AKIRIN1Q9H9L7 192 aaPredicted RBP23.03■■□□□ 1.28
GTF2A1-201ENST00000298173 CCDC187A0A096LP49 1063 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 CXCR6O00574 342 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 OR10H2O60403 315 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 C8BP07358 591 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 ZGLP1P0C6A0 271 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 FTH1P19P0C7X4 201 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 MATN1P21941 496 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 PRKAG1P54619 331 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 RBBP4Q09028 425 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 FBXW10Q5XX13 1052 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 CACTIN-AS1Q8N1I8 211 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 MAL2Q969L2 176 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 SLC35G5Q96KT7 338 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 TAAR9Q96RI9 348 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 ZPBPQ9BS86 351 aa23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 DDX18Q9NVP1 670 aaKnown RBP23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 FAF1Q9UNN5 650 aaPredicted RBP23.02■■□□□ 1.28
GTF2A1-201ENST00000298173 SPAARA0A1B0GVQ0 90 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 TCRBV5S2A0A599 114 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 PMS2P1A4D2B8 440 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 HMGN4O00479 90 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 STAMBPO95630 424 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 ATP6V1G2O95670 118 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 ALBP02768 609 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 MAN2A2P49641 1150 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 DSTNP60981 165 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 MINDY4Q4G0A6 757 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 GCNT6Q5T4J0 391 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 MRPL14Q6P1L8 145 aaKnown RBP23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 AAGABQ6PD74 315 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 SLC26A7Q8TE54 656 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 RIT1Q92963 219 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 DUS3LQ96G46 650 aaKnown RBP23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 C16orf58Q96GQ5 468 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 LRGUKQ96M69 825 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 DGAT2Q96PD7 388 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 PELOQ9BRX2 385 aaKnown RBP23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 DDA1Q9BW61 102 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 VN1R1Q9GZP7 353 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 FAM186AA6NE01 2351 aa23.01■■□□□ 1.27
GTF2A1-201ENST00000298173 TCRBV16S1A1N1A0A5B0 115 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 GSTA4O15217 222 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 FKBP6O75344 327 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 CREG1O75629 220 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 OCA2Q04671 838 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 LASP1Q14847 261 aaKnown RBP23■■□□□ 1.27
GTF2A1-201ENST00000298173 NKG7Q16617 165 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 EXOSC6Q5RKV6 272 aaKnown RBP23■■□□□ 1.27
GTF2A1-201ENST00000298173 TNFAIP8L2Q6P589 184 aaPredicted RBP23■■□□□ 1.27
GTF2A1-201ENST00000298173 SPATA24Q86W54 205 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 GALNT12Q8IXK2 581 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 C10orf67Q8IYJ2 551 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 GOLM1Q8NBJ4 401 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 C11orf65Q8NCR3 313 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 NETO1Q8TDF5 533 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 DOK4Q8TEW6 326 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 FIG4Q92562 907 aa23■■□□□ 1.27
GTF2A1-201ENST00000298173 TSLPQ969D9 159 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms