RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 CEP68Q76N32 757 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 PIWIL3Q7Z3Z3 882 aaKnown RBP14.61□□□□□ -0.07
LSM6-201ENST00000296581 GATAD2AQ86YP4 633 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 OR9A4Q8NGU2 314 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 OR4C6Q8NH72 309 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 SLC38A5Q8WUX1 472 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 TMBIM1Q969X1 311 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 TAMM41Q96BW9 452 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 DOHHQ9BU89 302 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 TPK1Q9H3S4 243 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 NTMQ9P121 344 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 AP4B1Q9Y6B7 739 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 FITM1A5D6W6 292 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 FOXS1O43638 330 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 MYF5P13349 255 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 CPMP14384 443 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 PNLIPP16233 465 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 CD1CP29017 333 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 CSF2RBP32927 897 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 SKP1P63208 163 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 KCNJ10P78508 379 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 PRR5P85299 388 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 TMEM52Q8NDY8 209 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 TANKQ92844 425 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 OR51I1Q9H343 314 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 Q9H521 79 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 C3orf14Q9HBI5 128 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 PLGRKTQ9HBL7 147 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 CAPN10Q9HC96 672 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 FSCN3Q9NQT6 498 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 KLHL3Q9UH77 587 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 ZNF451Q9Y4E5 1061 aa14.61□□□□□ -0.07
LSM6-201ENST00000296581 ASXL3Q9C0F0 2248 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 M0QX08 132 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 IFNA14P01570 189 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 ZNF23P17027 643 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 MATN1P21941 496 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 MC3RP41968 323 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 KHKP50053 298 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 TXNL4AP83876 142 aaKnown RBP14.6□□□□□ -0.07
LSM6-201ENST00000296581 LTB4RQ15722 352 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 IQCCQ4KMZ1 466 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 WDR74Q6RFH5 385 aaPredicted RBP14.6□□□□□ -0.07
LSM6-201ENST00000296581 SHISA5Q8N114 240 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 Q8N9G6 341 aaPredicted RBP14.6□□□□□ -0.07
LSM6-201ENST00000296581 OR6C4Q8NGE1 309 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 RAB8BQ92930 207 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 COX4I2Q96KJ9 171 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 OSBPL11Q9BXB4 747 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 OSBPL10Q9BXB5 764 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 GRIP2Q9C0E4 1043 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 GPC6Q9Y625 555 aaPredicted RBP14.6□□□□□ -0.07
LSM6-201ENST00000296581 ADAMTS9Q9P2N4 1935 aa14.6□□□□□ -0.07
LSM6-201ENST00000296581 HYKKA2RU49 373 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 FUOMA2VDF0 154 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 PLOD2O00469 737 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 DLGAP1O14490 977 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 EI24O14681 340 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 CHST10O43529 356 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 NSA2O95478 260 aaKnown RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 FABP3P05413 133 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 ANXA11P50995 505 aaKnown RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 RAB15P59190 212 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 VLDLRP98155 873 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 AMZ1Q400G9 498 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 KCTD21Q4G0X4 260 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 C6orf183Q5T699 404 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 BORAQ6PGQ7 559 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 SZRD1Q7Z422 152 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 PRSS42Q7Z5A4 293 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 RABEPKQ7Z6M1 372 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 OR4N5Q8IXE1 308 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 TTC29Q8NA56 475 aaPredicted RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 CEP76Q8TAP6 659 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 CCDC74AQ96AQ1 378 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 TMEM19Q96HH6 336 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 TPD52L3Q96J77 140 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 MAGED4Q96JG8 741 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 C7orf34Q96L11 122 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 CLK4Q9HAZ1 481 aaKnown RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 NCOR1O75376 2440 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 SCN2AQ99250 2005 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 A0A0A6YYC8 382 aaPredicted RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 LY6G6EA0A0G2JKS1 128 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 I3L1I5 382 aaPredicted RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 FGF17O60258 216 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 GPR75O95800 540 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 CFIP05156 583 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 HMGN2P05204 90 aaKnown RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 BCHEP06276 602 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 OR12D1P0DN82 309 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 HSD11B2P80365 405 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 COL9A2Q14055 689 aaPredicted RBP14.59□□□□□ -0.07
LSM6-201ENST00000296581 ZNF528Q3MIS6 628 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 NHSL2Q5HYW2 709 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 SVOPLQ8N434 492 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 MARVELD2Q8N4S9 558 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 FAM181AQ8N9Y4 354 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 NUP43Q8NFH3 380 aa14.59□□□□□ -0.07
LSM6-201ENST00000296581 SLC41A2Q96JW4 573 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms