RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 S100PBPQ96BU1 408 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 MIR1-1HGQ9H1L0 117 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 REEP4Q9H6H4 257 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLA2Q9H6Q3 261 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZDHHC4Q9NPG8 344 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 NLE1Q9NVX2 485 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ATPIF1Q9UII2 106 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 STUB1Q9UNE7 303 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 PLEKHA6Q9Y2H5 1048 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 A0A0G2JN53 185 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF878C9JN71 531 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 F5H0A9 414 aaPredicted RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 GPR37L1O60883 481 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 C6orf47O95873 294 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 JUNP05412 331 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 CD97P48960 835 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 UNC50Q53HI1 259 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 TMEM196Q5HYL7 178 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 NOXRED1Q6NXP6 359 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 TSPAN33Q86UF1 283 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 CLDN19Q8N6F1 224 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR2AP1Q8NGE2 309 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR52E4Q8NGH9 312 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 CHRDQ9H2X0 955 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 EPHX3Q9H6B9 360 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 UTS2RQ9UKP6 389 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZFR2Q9UPR6 939 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 C14orf166Q9Y224 244 aaKnown RBP11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 KCTD3Q9Y597 815 aa11.3□□□□□ -0.6
SYNGAP1-201ENST00000293748 SH3D21A4FU49 640 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 LRRTM2O43300 516 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 EEF1E1O43324 174 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 IGLV3-27P01718 113 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 STSP08842 583 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 T-ENOLP0DO92 83 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 SRCP12931 536 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 CRISP1P54107 249 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR4D2P58180 307 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ARF3P61204 181 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ACTC1P68032 377 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ACTA1P68133 377 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ARF1P84077 181 aaKnown RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 GALNT1Q10472 559 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 SCAPQ12770 1279 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 GDPGP1Q6ZNW5 385 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 CEP97Q8IW35 865 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ARL6Q9H0F7 186 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 NCDNQ9UBB6 729 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 GNG8Q9UK08 70 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 H3BMQ9 156 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 PCDH17O14917 1159 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ALPIP09923 528 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 GKN3PP0CG01 181 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 CD1DP15813 335 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ZNF30P17039 623 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 RORAP35398 523 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ENPP2Q13822 863 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 SIX1Q15475 284 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 PLEKHN1Q494U1 663 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR52E8Q6IFG1 317 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 GDPD4Q6W3E5 623 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 RNF130Q86XS8 419 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 PDZD9Q8IXQ8 264 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 JPH3Q8WXH2 748 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 COG8Q96MW5 612 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 TRIB3Q96RU7 358 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 MYNNQ9NPC7 610 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 CENPMQ9NSP4 180 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 TRBV23OR9-2A0A075B6M9 112 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 LOC100509620A0A075B734 347 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 TEX13DA0A0J9YY54 714 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 COQ9O75208 318 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 RASGRP1O95267 797 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 EGFP01133 1207 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 KLKB1P03952 638 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 CXCR1P25024 350 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 OXTRP30559 389 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 ACVRL1P37023 503 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 SLC6A11P48066 632 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 NCS1P62166 190 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 LMAN2Q12907 356 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 NTRK2Q16620 822 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR51G2Q8NGK0 314 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 OR14C36Q8NHC7 312 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 GRHL3Q8TE85 626 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 CCDC120Q96HB5 630 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 DPCDQ9BVM2 203 aaPredicted RBP11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 DLGAP4Q9Y2H0 992 aa11.29□□□□□ -0.6
SYNGAP1-201ENST00000293748 TCRBV21S2A2A0A5A6 115 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 GRID2O43424 1007 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 PCDHGA12O60330 932 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CREBL2O60519 120 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 DHRS4L1P0CG22 281 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CKMT1AP12532 417 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 HSD3B1P14060 373 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 CFL1P23528 166 aaKnown RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 HSD3B2P26439 372 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 ATXN7L3Q14CW9 347 aaPredicted RBP11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 FAM124AQ86V42 546 aa11.28□□□□□ -0.6
SYNGAP1-201ENST00000293748 MCEMP1Q8IX19 187 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms