RNA–Protein interactions for RNA: ENST00000288602.10

BRAF-201, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAF, Length 2,480 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-201ENST00000288602 PDE9AO76083 593 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 IGFBP1P08833 259 aaPredicted RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 CSNK2A2P19784 350 aaPredicted RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 CBLP22681 906 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 PSMB9P28065 219 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 LSM3P62310 102 aaKnown RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 C1orf61Q13536 156 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 SPCS2Q15005 226 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 PTGES3Q15185 160 aaKnown RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 GPAT3Q53EU6 434 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 RAB2BQ8WUD1 216 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 TOE1Q96GM8 510 aaKnown RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 OR2A5Q96R48 311 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 ACTR10Q9NZ32 417 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 TMEM9Q9P0T7 183 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 KCND3Q9UK17 655 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 GPC6Q9Y625 555 aaPredicted RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 TRIM64BA6NI03 449 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 TNFRSF10CO14798 259 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 TNRC18O15417 2968 aaPredicted RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 LSSP48449 732 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 ILF3Q12906 894 aaKnown RBP eCLIP18.16■□□□□ 0.5
BRAF-201ENST00000288602 FAM160A2Q8N612 972 aaPredicted RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 ZG16BQ96DA0 208 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 GAS2L1Q99501 681 aaPredicted RBP18.16■□□□□ 0.5
BRAF-201ENST00000288602 PCDHGB1Q9Y5G3 927 aa18.16■□□□□ 0.5
BRAF-201ENST00000288602 OR2A25A4D2G3 310 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 SERPINB7O75635 380 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 SOX14O95416 240 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 EPPINO95925 133 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 LCKP06239 509 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 SLC35G6P0C7Q6 338 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 ELAVL4P26378 380 aaKnown RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 PPP2R1BP30154 601 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 MPIP34949 423 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 PPP1CAP62136 330 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 LSM11P83369 360 aaKnown RBP eCLIP18.15■□□□□ 0.5
BRAF-201ENST00000288602 OCA2Q04671 838 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 RGS1Q08116 209 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 ZNF770Q6IQ21 691 aaPredicted RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 FIGLAQ6QHK4 219 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 RLN3Q8WXF3 142 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 SLC22A18Q96BI1 424 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 ZNF681Q96N22 645 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 PRR14Q9BWN1 585 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 ACOT13Q9NPJ3 140 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 EVA1BQ9NVM1 165 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 TRNAU1APQ9NX07 287 aaKnown RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 MRPS2Q9Y399 296 aaKnown RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 BCAS1O75363 584 aaPredicted RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 ALDH4A1P30038 563 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 BUD31P41223 144 aaPredicted RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 KHKP50053 298 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 SIM1P81133 766 aaPredicted RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 SFSWAPQ12872 951 aaKnown RBP18.15■□□□□ 0.5
BRAF-201ENST00000288602 KIR2DS3Q14952 304 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 C6orf132Q5T0Z8 1188 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 PRSS41Q7RTY9 318 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 NUP43Q8NFH3 380 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 RHOXF1Q8NHV9 184 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 KLHL6Q8WZ60 621 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 GAL3ST3Q96A11 431 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 PSME2Q9UL46 239 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 ZNF780BQ9Y6R6 833 aa18.15■□□□□ 0.5
BRAF-201ENST00000288602 CCDC85CA6NKD9 419 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 OR10H3O60404 316 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 NR2F6P10588 404 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 CHMP24386 653 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 CTSKP43235 329 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 CRISP3P54108 245 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 YPEL5P62699 121 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 ID2Q02363 134 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 RUNX2Q13950 521 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 ZNF438Q7Z4V0 828 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 ELP4Q96EB1 424 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 COPS4Q9BT78 406 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 GPR174Q9BXC1 333 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 GPR83Q9NYM4 423 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 ANKMY1Q9P2S6 941 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 CPNE7Q9UBL6 633 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 ENPP5Q9UJA9 477 aa18.14■□□□□ 0.5
BRAF-201ENST00000288602 LRP4O75096 1905 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 FHP07954 510 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 CPN2P22792 545 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 HPCAP84074 193 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 CTF1Q16619 201 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 TBC1D15Q8TC07 691 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 OR7D2Q96RA2 312 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 STARD5Q9NSY2 213 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 GIMAP4Q9NUV9 329 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 ZSCAN32Q9NX65 697 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 TMCC3Q9ULS5 477 aa18.14■□□□□ 0.49
BRAF-201ENST00000288602 FRS3O43559 492 aa18.13■□□□□ 0.49
BRAF-201ENST00000288602 TNFP01375 233 aa18.13■□□□□ 0.49
BRAF-201ENST00000288602 H1F0P07305 194 aaKnown RBP18.13■□□□□ 0.49
BRAF-201ENST00000288602 TSFMP43897 325 aaKnown RBP18.13■□□□□ 0.49
BRAF-201ENST00000288602 TGM3Q08188 693 aa18.13■□□□□ 0.49
BRAF-201ENST00000288602 DCST1Q5T197 706 aa18.13■□□□□ 0.49
BRAF-201ENST00000288602 DHRS4L2Q6PKH6 230 aa18.13■□□□□ 0.49
BRAF-201ENST00000288602 FAM111BQ6SJ93 734 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms