RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 HEMK1Q9Y5R4 338 aaPredicted RBP8.49□□□□□ -1.05
HMGN1-201ENST00000288344 CLCA3PQ9Y6N3 262 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 SPACA6W5XKT8 324 aa8.49□□□□□ -1.05
HMGN1-201ENST00000288344 NINQ8N4C6 2090 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 DOPEY2Q9Y3R5 2298 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 TRBV11-1A0A0K0K1C0 115 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 DYTNA2CJ06 578 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 MYO1GB0I1T2 1018 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 TBX19O60806 448 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 ITGA10O75578 1167 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 CBX7O95931 251 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 JUNP05412 331 aaKnown RBP8.48□□□□□ -1.05
HMGN1-201ENST00000288344 SP1P08047 785 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 PORP16435 677 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-201ENST00000288344 HMOX2P30519 316 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 FRKP42685 505 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-201ENST00000288344 TAS2R50P59544 299 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 OR1C1Q15619 314 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 ARSJQ5FYB0 599 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-201ENST00000288344 FHL5Q5TD97 284 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 IRAK1BP1Q5VVH5 260 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 NOXRED1Q6NXP6 359 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 HSDL2Q6YN16 418 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 CROCCP2Q86T23 111 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 RIT1Q92963 219 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 ARL8AQ96BM9 186 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 ZBTB9Q96C00 473 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF764Q96H86 408 aaPredicted RBP8.48□□□□□ -1.05
HMGN1-201ENST00000288344 RASL10BQ96S79 203 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 DEFB126Q9BYW3 111 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 SLAMF7Q9NQ25 335 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 MAT2BQ9NZL9 334 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 TEKT2Q9UIF3 430 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 COPG1Q9Y678 874 aaKnown RBP8.48□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF407Q9C0G0 2248 aa8.48□□□□□ -1.05
HMGN1-201ENST00000288344 CRYBG3Q68DQ2 2970 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 DNAJC13O75165 2243 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 PCNX1Q96RV3 2341 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ARHGAP10A1A4S6 786 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 SLC28A1O00337 649 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ADAM10O14672 748 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 PCDH7O60245 1069 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 NME2P1O60361 137 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 SNNO75324 88 aaPredicted RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 OR2J2O76002 312 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 OR6B1O95007 311 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ZWINTO95229 277 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 PSMG1O95456 288 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 IFNA16P05015 189 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 IL3P08700 152 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ANXA4P09525 319 aaPredicted RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 DDCP20711 480 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 NME2P22392 152 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 SSTR4P31391 388 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 MAP3K8P41279 467 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 GSTM5P46439 218 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 UQCRFS1P47985 274 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 EMDP50402 254 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ARG2P78540 354 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ACSM2AQ08AH3 577 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 FOXO1Q12778 655 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 PDE7AQ13946 482 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 EBPQ15125 230 aaKnown RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 INAQ16352 499 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 TRMT12Q53H54 448 aaKnown RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF628Q5EBL2 1059 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF766Q5HY98 468 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 CFAP157Q5JU67 520 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ACSM2BQ68CK6 577 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 SLC25A25Q6KCM7 469 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 FAM180BQ6P0A1 224 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 FAM111BQ6SJ93 734 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 NUDCD3Q8IVD9 361 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 RIMKLAQ8IXN7 391 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ZFP62Q8NB50 900 aaPredicted RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 DNAJB8Q8NHS0 232 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 C16orf52Q8NHV5 167 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ZNF675Q8TD23 568 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 HOXB13Q92826 284 aaPredicted RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 PKNOX2Q96KN3 472 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 FRMD6Q96NE9 622 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 DGAT2Q96PD7 388 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 UTP23Q9BRU9 249 aaKnown RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 PELOQ9BRX2 385 aaKnown RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 OR8D2Q9GZM6 311 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 RUBCNLQ9H714 662 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 MYNNQ9NPC7 610 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 DEPPQ9NTK1 212 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 C1orf109Q9NX04 203 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ANKRD10Q9NXR5 420 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 NTMQ9P121 344 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 LRFN1Q9P244 771 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ABI3Q9P2A4 366 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 ERVK-11Q9UQG0 969 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 DTX4Q9Y2E6 619 aa8.47□□□□□ -1.05
HMGN1-201ENST00000288344 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.47□□□□□ -1.05
HMGN1-201ENST00000288344 CELSR2Q9HCU4 2923 aa8.46□□□□□ -1.05
HMGN1-201ENST00000288344 SPTBN1Q01082 2364 aaKnown RBP8.46□□□□□ -1.05
HMGN1-201ENST00000288344 ICE1Q9Y2F5 2266 aa8.46□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms