RNA–Protein interactions for RNA: ENST00000284770.9

PDLIM3-202, Transcript of PDZ and LIM domain 3, humanhuman

TSL 1 (best) BASIC

Gene PDLIM3, Length 1,766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-202ENST00000284770 IFNEQ86WN2 208 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 C10orf111Q8N326 155 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 BHLHE22Q8NFJ8 381 aaPredicted RBP17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 SFXN5Q8TD22 340 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 ZNF675Q8TD23 568 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 KAT2AQ92830 837 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 TSLPQ969D9 159 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 MOAP1Q96BY2 351 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 NEURL3Q96EH8 262 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 DGAT2Q96PD7 388 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 PELOQ9BRX2 385 aaKnown RBP17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 C3orf14Q9HBI5 128 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 NXT1Q9UKK6 140 aaKnown RBP17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 CORO2BQ9UQ03 480 aa17.69■□□□□ 0.42
PDLIM3-202ENST00000284770 TCRBV16S1A1N1A0A5B0 115 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 C9J4A7 227 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 KRT36O76013 467 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 IFI6P09912 130 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 CCNYL3P0C7X3 344 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 GALNSP34059 522 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 SOX18P35713 384 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 GZMMP51124 257 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 OR4D2P58180 307 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 MRPS35P82673 323 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 PRR5P85299 388 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 VAC14Q08AM6 782 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 MGAT2Q10469 447 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 SAXO2Q658L1 398 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 BHLHB9Q6PI77 547 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 SHISA6Q6ZSJ9 500 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 TIPARPQ7Z3E1 657 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 CALHM3Q86XJ0 350 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 HIPK4Q8NE63 616 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 OR7G2Q8NG99 324 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 OR10A6Q8NH74 314 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 PNPT1Q8TCS8 783 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 RIT1Q92963 219 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 CTHRC1Q96CG8 243 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 SLC46A1Q96NT5 459 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 SPSB2Q99619 263 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 SOX17Q9H6I2 414 aaPredicted RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 DCLRE1BQ9H816 532 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 CXorf21Q9HAI6 301 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 RNPEPL1Q9HAU8 725 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 ZCCHC3Q9NUD5 404 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 GPATCH2Q9NW75 528 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 MAT2BQ9NZL9 334 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 NTMQ9P121 344 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 PTGFRNQ9P2B2 879 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 EGFL7Q9UHF1 273 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 WDFY3Q8IZQ1 3526 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 DCDC2BA2VCK2 349 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 SYNDIG1LA6NDD5 238 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 IDSB3KWA1 339 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 EMC8O43402 210 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 IFNA16P05015 189 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 MVDP53602 400 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 FOXL2P58012 376 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 GABREP78334 506 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 MAP4K2Q12851 820 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 ANGPTL8Q6UXH0 198 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 DGAT2L6Q6ZPD8 337 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 C6orf120Q7Z4R8 191 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 OR2L13Q8N349 312 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 ENDOVQ8N8Q3 282 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 OR52N2Q8NGI0 321 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 STMN2Q93045 179 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 MAGED4Q96JG8 741 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 TMEM121BQ9BXQ6 578 aaPredicted RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 MUC13Q9H3R2 512 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 PIF1Q9H611 641 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 BCAP29Q9UHQ4 241 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 NUP210LQ5VU65 1888 aa17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 CNOT1A5YKK6 2376 aaKnown RBP17.68■□□□□ 0.42
PDLIM3-202ENST00000284770 A0A087WV62 115 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 UPK1AO00322 258 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 PLOD3O60568 738 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 HEXBP07686 556 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 CT62P0C5K7 136 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 TP53BP2Q13625 1128 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 NCF4Q15080 339 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 RGNQ15493 299 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 TRMT12Q53H54 448 aaKnown RBP17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 DDX59Q5T1V6 619 aaKnown RBP eCLIP17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 FAM111BQ6SJ93 734 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 DHFR2Q86XF0 187 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 RNF130Q86XS8 419 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 GALNT12Q8IXK2 581 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 OR56A1Q8NGH5 318 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 RASSF4Q9H2L5 321 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 RAD21L1Q9H4I0 556 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 DDX18Q9NVP1 670 aaKnown RBP17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 ACTR3BQ9P1U1 418 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 NKX1-2Q9UD57 310 aaPredicted RBP17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 PRDM4Q9UKN5 801 aa17.67■□□□□ 0.42
PDLIM3-202ENST00000284770 ARPC2O15144 300 aa17.66■□□□□ 0.42
PDLIM3-202ENST00000284770 FKBP6O75344 327 aa17.66■□□□□ 0.42
PDLIM3-202ENST00000284770 CYC1P08574 325 aa17.66■□□□□ 0.42
PDLIM3-202ENST00000284770 CD63P08962 238 aa17.66■□□□□ 0.42
PDLIM3-202ENST00000284770 ATP6V1B2P21281 511 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 150.3 ms