RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 PUDPQ08623 228 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 DUSP6Q16828 381 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 DUOXA1Q1HG43 343 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 COL28A1Q2UY09 1125 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 SYTL3Q4VX76 610 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 TMPRSS9Q7Z410 1059 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 BCDIN3DQ7Z5W3 292 aaKnown RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 TMEM25Q86YD3 366 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 BMPERQ8N8U9 685 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 OR9Q2Q8NGE9 314 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 OR8D4Q8NGM9 314 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 CSGALNACT1Q8TDX6 532 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 ASZ1Q8WWH4 475 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 ATOH1Q92858 354 aaPredicted RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 POP5Q969H6 163 aaKnown RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 ECHDC3Q96DC8 303 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 WBP1Q96G27 269 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 MS4A3Q96HJ5 214 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 MTERF1Q99551 399 aaKnown RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 NPAS1Q99742 590 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 SLC46A2Q9BY10 475 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 GABARAPL3Q9BY60 117 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 CPEB1Q9BZB8 566 aaKnown RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 POLR2J2Q9GZM3 115 aaKnown RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 CUEDC1Q9NWM3 386 aaPredicted RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 EXO1Q9UQ84 846 aaKnown RBP7.23□□□□□ -1.25
TRIM6-201ENST00000278302 HS3ST2Q9Y278 367 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 PADI2Q9Y2J8 665 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 PRELID3BQ9Y3B1 194 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 PPIL1Q9Y3C6 166 aa7.23□□□□□ -1.25
TRIM6-201ENST00000278302 NINQ8N4C6 2090 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 LINC00587B1AMM8 73 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SLC16A5O15375 505 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 CCL16O15467 120 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SCG5P05408 212 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 C8AP07357 584 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 JUPP14923 745 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 GABRB1P18505 474 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 PRPS1L1P21108 318 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 F8A1P23610 371 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 OR1E2P47887 323 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 AP1S2P56377 157 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 DEFB103AP81534 67 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SPHARQ15513 63 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SF1Q15637 639 aaKnown RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 TFAP2EQ6VUC0 442 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 GHDCQ8N2G8 530 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 OR7G3Q8NG95 312 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 MYLIPQ8WY64 445 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 TXNL4BQ9NX01 149 aaKnown RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SLCO1C1Q9NYB5 712 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 HCN3Q9P1Z3 774 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SSR3Q9UNL2 185 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 PRKAB1Q9Y478 270 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 CDH10Q9Y6N8 788 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 HTTP42858 3142 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 IGLV3-16A0A075B6K0 115 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 A0A1B0GVC2 190 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 A6NIN4 97 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 PRSS44E7EML9 344 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 GFYI3L273 518 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SLC30A4O14863 429 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 GMDSO60547 372 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 FKTNO75072 461 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 NCR1O76036 304 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 CXCL14O95715 111 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 HBQ1P09105 142 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 HOXB6P17509 224 aaKnown RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 RAB3AP20336 220 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 AVPR1BP47901 424 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SRSF11Q05519 484 aaKnown RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 ACSM2AQ08AH3 577 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 BAMBIQ13145 260 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SP140Q13342 867 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 TSTA3Q13630 321 aaPredicted RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 DSG2Q14126 1118 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 EIF4HQ15056 248 aaKnown RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 ETFDHQ16134 617 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 ACSM2BQ68CK6 577 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 PLAG1Q6DJT9 500 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 ASTLQ6HA08 431 aaPredicted RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SLC39A5Q6ZMH5 540 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 Q6ZVL8 140 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 THOC6Q86W42 341 aaKnown RBP7.22□□□□□ -1.25
TRIM6-201ENST00000278302 LILRB2Q8N423 598 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 RNF208Q9H0X6 261 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 BEX1Q9HBH7 125 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 VPS29Q9UBQ0 182 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 RPS6KA6Q9UK32 745 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 SPATA2Q9UM82 520 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 STUB1Q9UNE7 303 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 CCL26Q9Y258 94 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 MAB21L2Q9Y586 359 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 HYKKA2RU49 373 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 MAGEB17A8MXT2 336 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 QSOX1O00391 747 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 PRAMEF4O60810 478 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 APOC3P02656 99 aa7.22□□□□□ -1.25
TRIM6-201ENST00000278302 OPN1SWP03999 348 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms