RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 TNRC18O15417 2968 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GIMAP1-GIMAP5A0A087WTJ2 511 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 ABCB7O75027 752 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CHRM4P08173 479 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CCDC159P0C7I6 412 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 FASLGP48023 281 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 MAN2A2P49641 1150 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 VSX2P58304 361 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GABARAPL2P60520 117 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 OLR1P78380 273 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 RPL6Q02878 288 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 FUT5Q11128 374 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PMS2P3Q13401 168 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PUS10Q3MIT2 529 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 C6orf132Q5T0Z8 1188 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PRAMEF8Q5VWM4 474 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PRAMEF7Q5VXH5 474 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 TCTN3Q6NUS6 607 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 OLIG3Q7RTU3 272 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PRSS41Q7RTY9 318 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 OR4N5Q8IXE1 308 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 SIX5Q8N196 739 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 LRRC25Q8N386 305 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CSNK1A1LQ8N752 337 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 OR4D11Q8NGI4 311 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 LMX1AQ8TE12 382 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF566Q969W8 418 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GIMAP5Q96F15 307 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 SPATA5L1Q9BVQ7 753 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 ACTRT3Q9BYD9 372 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 ANKRA2Q9H9E1 313 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 UCK1Q9HA47 277 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 IL21RQ9HBE5 538 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PAPOLBQ9NRJ5 636 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 RHCGQ9UBD6 479 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 KCND3Q9UK17 655 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 BLOC1S6Q9UL45 172 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 POFUT2Q9Y2G5 429 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 HCN4Q9Y3Q4 1203 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GOLGA4Q13439 2230 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 SPTBN5Q9NRC6 3674 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 ZNF860A6NHJ4 632 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 SLC1A7O00341 560 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CYR61O00622 381 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 HCRTR1O43613 425 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 ASNA1O43681 348 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 AHCYL1O43865 530 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GALR3O60755 368 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 UBXN7O94888 489 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CCNB2O95067 398 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PORP16435 677 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CDH3P22223 829 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 TTKP33981 857 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CXCR4P61073 352 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GANABQ14697 944 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GPAT3Q53EU6 434 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 COLEC12Q5KU26 742 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 KLHL35Q6PF15 583 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 B3GNT6Q6ZMB0 384 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 RBM45Q8IUH3 476 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 MCATQ8IVS2 390 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 SPARTQ8N0X7 666 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 AVL9Q8NBF6 648 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 BPIFB6Q8NFQ5 453 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 OR7G2Q8NG99 324 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 C1orf216Q8TAB5 229 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CNIH3Q8TBE1 160 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 PHF10Q8WUB8 498 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 SGCDQ92629 289 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 COL26A1Q96A83 441 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 CLDN23Q96B33 292 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 SLC35A4Q96G79 324 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 HRASLS5Q96KN8 279 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 ALPK1Q96QP1 1244 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 NIPSNAP1Q9BPW8 284 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 TUBA1CQ9BQE3 449 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 WFDC6Q9BQY6 131 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 BTBD2Q9BX70 525 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 MIR1-1HGQ9H1L0 117 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 NMNAT1Q9HAN9 279 aaPredicted RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 STARD5Q9NSY2 213 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 DNAAF2Q9NVR5 837 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 GIN1Q9NXP7 522 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 RSL24D1Q9UHA3 163 aaKnown RBP9.01□□□□□ -0.97
TRIM55-201ENST00000276573 DOLKQ9UPQ8 538 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 LIPT1Q9Y234 373 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 NAALAD2Q9Y3Q0 740 aa9.01□□□□□ -0.97
TRIM55-201ENST00000276573 TDRD6O60522 2096 aaKnown RBP9□□□□□ -0.97
TRIM55-201ENST00000276573 SLC9B1P1A6NJY1 282 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 PTGES3LE9PB15 166 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 KIF1CO43896 1103 aaKnown RBP9□□□□□ -0.97
TRIM55-201ENST00000276573 SEMA7AO75326 666 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 CPNE6O95741 557 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 ANGPTL1O95841 491 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 LGI1O95970 557 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 PROS1P07225 676 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 CPMP14384 443 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 CBLP22681 906 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 PEX19P40855 299 aa9□□□□□ -0.97
TRIM55-201ENST00000276573 LSAMPQ13449 338 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms