RNA–Protein interactions for RNA: ENST00000274071.6

PDGFC-201, Transcript of platelet derived growth factor C, humanhuman

TSL 1 (best)

Gene PDGFC, Length 2,987 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-201ENST00000274071 SLC39A12Q504Y0 691 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 LRRN1Q6UXK5 716 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 DEF8Q6ZN54 512 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 CALHM3Q86XJ0 350 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SKA3Q8IX90 412 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 RYBPQ8N488 228 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 PRR18Q8N4B5 295 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 CHTF18Q8WVB6 975 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 HBEGFQ99075 208 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 ATF6BQ99941 703 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 SPRTNQ9H040 489 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 AP5M1Q9H0R1 490 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 RIMS4Q9H426 269 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 REEP4Q9H6H4 257 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 OPA3Q9H6K4 179 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 BARX1Q9HBU1 254 aaPredicted RBP8.76□□□□□ -1.01
PDGFC-201ENST00000274071 PIPOXQ9P0Z9 390 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 NTMQ9P121 344 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 CPA4Q9UI42 421 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF225Q9UK10 706 aa8.76□□□□□ -1.01
PDGFC-201ENST00000274071 KIAA1217Q5T5P2 1943 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ERI2A8K979 691 aaKnown RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 C1orf196B1AJZ1 125 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 PPEF2O14830 753 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 FZD7O75084 574 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 SLC34A2O95436 690 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ADCYAP1P18509 176 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 HTR5AP47898 357 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 RAC1P63000 192 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 VGLL4Q14135 290 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 UBXN2BQ14CS0 331 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 SLC14A2Q15849 920 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF699Q32M78 642 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF549Q6P9A3 640 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ZC3H14Q6PJT7 736 aaKnown RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 GSG1LQ6UXU4 331 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 TMUB2Q71RG4 321 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 REC114Q7Z4M0 266 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF511Q8NB15 262 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 TMIEQ8NEW7 156 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 OR4A15Q8NGL6 344 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 RFT1Q96AA3 541 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 FAM120BQ96EK7 910 aaKnown RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 RLIMQ9NVW2 624 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 VSX1Q9NZR4 365 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 TMEM218A2RU14 115 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 FAM220BPB1ANY3 271 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 J3KR12 359 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 KIAA0355O15063 1070 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 GALR3O60755 368 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 HCKP08631 526 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ODC1P11926 461 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 GNSP15586 552 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 UGT2B7P16662 529 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 CD96P40200 585 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ARL4AP40617 200 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 RBP2P50120 134 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 CCR6P51684 374 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 RABGGTBP53611 331 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 CLDN8P56748 225 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 MBTD1Q05BQ5 628 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 POU4F2Q12837 409 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 DUOXA1Q1HG43 343 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 PAQR6Q6TCH4 344 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 MISPQ8IVT2 679 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 RNF113BQ8IZP6 322 aaKnown RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 C1orf52Q8N6N3 182 aaKnown RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 POP5Q969H6 163 aaKnown RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 TCEAL4Q96EI5 215 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 WDR89Q96FK6 387 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 LRR1Q96L50 414 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 DUSP26Q9BV47 211 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ARL6Q9H0F7 186 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 GBA2Q9HCG7 927 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 ZNF624Q9P2J8 865 aaPredicted RBP8.75□□□□□ -1.01
PDGFC-201ENST00000274071 CA5BQ9Y2D0 317 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 MIA3Q5JRA6 1907 aa8.75□□□□□ -1.01
PDGFC-201ENST00000274071 COLCA2A8K830 154 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 RFXAPO00287 272 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 IFRD1O00458 451 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 IGF2P01344 180 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 MBP02144 154 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SEMG1P04279 462 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 FOLR2P14207 255 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 PPP3CBP16298 524 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 PBLDP30039 288 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 TNFSF9P41273 254 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 CTSOP43234 321 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 PPT1P50897 306 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SP4Q02446 784 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 MLLT11Q13015 90 aaPredicted RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SMAD4Q13485 552 aaKnown RBP8.74□□□□□ -1.01
PDGFC-201ENST00000274071 HECTD2Q5U5R9 776 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 AADACL4Q5VUY2 407 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 ATG9BQ674R7 924 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 UNQ6494/PRO21346Q6UXR6 183 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 DCUN1D3Q8IWE4 304 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 SLC5A8Q8N695 610 aa8.74□□□□□ -1.01
PDGFC-201ENST00000274071 BOLLQ8N9W6 283 aaKnown RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms