RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 FNDC3BQ53EP0 1204 aaKnown RBP15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 EEF1AKMT2Q5JPI9 291 aaKnown RBP15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 RNF165Q6ZSG1 346 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 COMMD7Q86VX2 200 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SLC34A3Q8N130 599 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 FAM181AQ8N9Y4 354 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 FBXW5Q969U6 566 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 IL4I1Q96RQ9 567 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 TPT1P8Q9HAU6 139 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GDE1Q9NZC3 331 aa15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ELF5Q9UKW6 265 aaPredicted RBP15.13■□□□□ 0.01
MAP1LC3B-201ENST00000268607 J3KTA2 159 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CSO75390 466 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ASGR2P07307 311 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 HOXD4P09016 255 aaPredicted RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ACPPP15309 386 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 POU1F1P28069 291 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 WNT3P56703 355 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CDC42P60953 191 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 HNRNPA0Q13151 305 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CHIT1Q13231 466 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MAB21L1Q13394 359 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 UGT8Q16880 541 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MICAQ29983 383 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ADNP2Q6IQ32 1131 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 BTN2A2Q8WVV5 523 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MED8Q96G25 268 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 C19orf43Q9BQ61 176 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 IL36AQ9UHA7 158 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 NDRG2Q9UN36 371 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GOLGA4Q13439 2230 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ZNF106Q9H2Y7 1883 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 IQCMA0A1B0GVH7 501 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SCN2BO60939 215 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 AP2A2O94973 939 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 OPRD1P41143 372 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 BTN1A1Q13410 526 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 TSTA3Q13630 321 aaPredicted RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 VEZF1Q14119 521 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 AANATQ16613 207 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 C2orf27AQ580R0 203 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 OR4C15Q8NGM1 316 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 AKAP1Q92667 903 aaKnown RBP eCLIP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 FERD3LQ96RJ6 166 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MTERF1Q99551 399 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MCCC2Q9HCC0 563 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 DZANK1Q9NVP4 752 aa15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CNOT2Q9NZN8 540 aaKnown RBP15.12■□□□□ 0.01
MAP1LC3B-201ENST00000268607 PCDH17O14917 1159 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GCM2O75603 506 aaPredicted RBP15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 NFATC1O95644 943 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 C8GP07360 202 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 PDHA2P29803 388 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CNR2P34972 360 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ETV1P50549 477 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 KLHL17Q6TDP4 642 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GPR155Q7Z3F1 870 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 RASGEF1AQ8N9B8 481 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GDPD1Q8N9F7 314 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ATP6V1C2Q8NEY4 427 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CREB3L4Q8TEY5 395 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 RIT1Q92963 219 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 HYLS1Q96M11 299 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CDCA3Q99618 268 aaPredicted RBP15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SPNS1Q9H2V7 528 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GALNT9Q9HCQ5 603 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ZNF304Q9HCX3 659 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CLN6Q9NWW5 311 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 NLKQ9UBE8 527 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ATP6V1HQ9UI12 483 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 STUB1Q9UNE7 303 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GFYI3L273 518 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 PDE9AO76083 593 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 COX7A2P14406 83 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 BDKRB1P46663 353 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MAN2A2P49641 1150 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 RAB25P57735 213 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MRPL28Q13084 256 aaKnown RBP15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MTAPQ13126 283 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 NFE2L1Q14494 772 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ZNF234Q14588 700 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SPHARQ15513 63 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 CLVS2Q5SYC1 327 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 LIPKQ5VXJ0 399 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SYT12Q8IV01 421 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 TTLQ8NG68 377 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ASZ1Q8WWH4 475 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 GIMAP1Q8WWP7 306 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 TMEM203Q969S6 136 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 AP2M1Q96CW1 435 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 OTUB2Q96DC9 234 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SLC29A3Q9BZD2 475 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SLC6A17Q9H1V8 727 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 TMEM245Q9H330 911 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 WASH6PQ9NQA3 447 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MARK1Q9P0L2 795 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 SEC14L4Q9UDX3 406 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 MAPRE3Q9UPY8 281 aa15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 LSM2Q9Y333 95 aaKnown RBP15.11■□□□□ 0.01
MAP1LC3B-201ENST00000268607 ARHGEF33A8MVX0 844 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms