RNA–Protein interactions for RNA: ENST00000264828.3

COL5A3-201, Transcript of collagen type V alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL5A3, Length 6,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A3-201ENST00000264828 SHMT2P34897 504 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 RAB5BP61020 215 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 FADDQ13158 208 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 NDNFQ8TB73 568 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 MYNNQ9NPC7 610 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 FAIMQ9NVQ4 179 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 ICKQ9UPZ9 632 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 PCDHGA8Q9Y5G5 932 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 VSTM5A8MXK1 200 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 ADH1BP00325 375 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 OXTRP30559 389 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 ZNF84P51523 738 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 PLP2Q04941 152 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 DEFB134Q4QY38 66 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 CLECL1Q8IZS7 167 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 MAL2Q969L2 176 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 LHPPQ9H008 270 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 BRINP1O60477 761 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 RHCEP18577 417 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 CD34P28906 385 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 KCNC1P48547 511 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 HSD11B2P80365 405 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 INCA1Q0VD86 236 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 HES5Q5TA89 166 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 BCL2L15Q5TBC7 163 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 C6orf120Q7Z4R8 191 aa17.18■□□□□ 0.34
COL5A3-201ENST00000264828 LATS1O95835 1130 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 RFC2P35250 354 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 FASLGP48023 281 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 PITX1P78337 314 aaPredicted RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 SLC10A2Q12908 348 aaPredicted RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 PON2Q15165 354 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 OR4N5Q8IXE1 308 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 IGSF8Q969P0 613 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 B3GALT1Q9Y5Z6 326 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 SORBS2O94875 1100 aaKnown RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 POU3F4P49335 361 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 PLCXD2Q0VAA5 305 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 BAIAP2L2Q6UXY1 529 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 METTL25Q8N6Q8 603 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 MR1Q95460 341 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 BIRC8Q96P09 236 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 ZNF696Q9H7X3 374 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 RTCAO00442 366 aaKnown RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 SCAMP2O15127 329 aaKnown RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 SOX30O94993 753 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 S1PR4O95977 384 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 ADRB3P13945 408 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 CAMLGP49069 296 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 ZNF33AQ06730 810 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 ETFAP13804 333 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 IFNGR1P15260 489 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 LMAN2Q12907 356 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 TLR9Q9NR96 1032 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 TNFSF12O43508 249 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 UCHL1P09936 223 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 HLCSP50747 726 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 RBM39Q14498 530 aaKnown RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 ZNF791Q3KP31 576 aaPredicted RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 RPS26P11Q5JNZ5 115 aaPredicted RBP17.17■□□□□ 0.34
COL5A3-201ENST00000264828 ANKRD54Q6NXT1 300 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 PLBD1Q6P4A8 553 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 ZER1Q7Z7L7 766 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 EGFL6Q8IUX8 553 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 TSPEARQ8WU66 669 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 PRODH2Q9UF12 536 aa17.17■□□□□ 0.34
COL5A3-201ENST00000264828 UNCXA6NJT0 531 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 PAK4O96013 591 aaPredicted RBP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 PTH2RP49190 550 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 ACTA2P62736 377 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 ACTG2P63267 376 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 ECH1Q13011 328 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 IER5LQ5T953 404 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 RELL1Q8IUW5 271 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 TRUB1Q8WWH5 349 aaKnown RBP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 IMP4Q96G21 291 aaKnown RBP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 ERCC1P07992 297 aaPredicted RBP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 DRD5P21918 477 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 RIDAP52758 137 aaKnown RBP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 GSG1LQ6UXU4 331 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 LRRC25Q8N386 305 aaPredicted RBP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 TMEM234Q8WY98 164 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 LMF1Q96S06 567 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 URM1Q9BTM9 101 aaKnown RBP17.16■□□□□ 0.34
COL5A3-201ENST00000264828 PPP4R1LQ9P1A2 415 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 MPC1LP0DKB6 136 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 MAP4K2Q12851 820 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 GPR17Q13304 367 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 RAB11BQ15907 218 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 ZNF805Q5CZA5 627 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 BLOC1S3Q6QNY0 202 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 OR52B6Q8NGF0 335 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 FAM46BQ96A09 425 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 SGTBQ96EQ0 304 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 POTEKPQ9BYX7 375 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 ACTR6Q9GZN1 396 aa17.16■□□□□ 0.34
COL5A3-201ENST00000264828 GABRQQ9UN88 632 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms