RNA–Protein interactions for RNA: ENST00000263897.9

USE1-201, Transcript of unconventional SNARE in the ER 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USE1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-201ENST00000263897 ERAL1O75616 437 aaKnown RBP14.8□□□□□ -0.04
USE1-201ENST00000263897 CLDN14O95500 239 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 IGHG3P01860 377 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 PROCP04070 461 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 ATP1B1P05026 303 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 MYL2P10916 166 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 KRT15P19012 456 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 CRHR1P34998 444 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 FEN1P39748 380 aaKnown RBP14.8□□□□□ -0.04
USE1-201ENST00000263897 HTR6P50406 440 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 MGAT2Q10469 447 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 SLC10A1Q14973 349 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 CDSNQ15517 529 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 NTRK2Q16620 822 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 PRICKLE4Q2TBC4 344 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 CCDC153Q494R4 210 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 GXYLT1Q4G148 440 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 EMC4Q5J8M3 183 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 C6orf163Q5TEZ5 329 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 FAM111BQ6SJ93 734 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 TMEM64Q6YI46 380 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 FBXW8Q8N3Y1 598 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 OR10G3Q8NGC4 313 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 ADIPOR1Q96A54 375 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 ACPTQ9BZG2 426 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 MID1IP1Q9NPA3 183 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 ZNF639Q9UID6 485 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 NPFFR2Q9Y5X5 522 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 FREM3P0C091 2139 aa14.8□□□□□ -0.04
USE1-201ENST00000263897 A0A1B0GVC2 190 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 ATP6AP2A0A1C7CYW4 349 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 CAPN14A8MX76 684 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 NPIPA2E9PIF3 369 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 NPIPA3F8WFD2 350 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 UBFD1O14562 309 aaKnown RBP14.79□□□□□ -0.04
USE1-201ENST00000263897 SUSD5O60279 629 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 PLIN3O60664 434 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 ATP6AP2O75787 350 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 DRD2P14416 443 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 ALDH9A1P49189 494 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 NAGLUP54802 743 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 NAA20P61599 178 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 KCNJ2P63252 427 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 RAE1P78406 368 aaKnown RBP14.79□□□□□ -0.04
USE1-201ENST00000263897 PRAMEF20Q5VT98 475 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 TMEM211Q6ICI0 200 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 TRILQ7L0X0 811 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 VWA5B2Q8N398 1253 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 C17orf47Q8NEP4 570 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 OR5M3Q8NGP4 307 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 CTHRC1Q96CG8 243 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 KLHL29Q96CT2 875 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 C11orf24Q96F05 449 aaPredicted RBP14.79□□□□□ -0.04
USE1-201ENST00000263897 CNRIP1Q96F85 164 aaPredicted RBP14.79□□□□□ -0.04
USE1-201ENST00000263897 APIPQ96GX9 242 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 ZNF681Q96N22 645 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 KCNA7Q96RP8 456 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 TP63Q9H3D4 680 aaPredicted RBP14.79□□□□□ -0.04
USE1-201ENST00000263897 RUBCNLQ9H714 662 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 ZFP64Q9NPA5 681 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 MAT2BQ9NZL9 334 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 HEY2Q9UBP5 337 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 CNOT11Q9UKZ1 510 aaKnown RBP14.79□□□□□ -0.04
USE1-201ENST00000263897 DLGAP4Q9Y2H0 992 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 ZNF780BQ9Y6R6 833 aa14.79□□□□□ -0.04
USE1-201ENST00000263897 GNG14A0A1W2PPG7 69 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 ANKRD33BA6NCL7 494 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 OR14I1A6ND48 311 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 SMIM23A6NLE4 172 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 TP53I11O14683 189 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 CELA3AP09093 270 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 RFPL3SP0C7P2 107 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 SOX18P35713 384 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 DNAJB13P59910 316 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 HMGCS1Q01581 520 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 DUSP2Q05923 314 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 ACSM2AQ08AH3 577 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 TRMT12Q53H54 448 aaKnown RBP14.78□□□□□ -0.04
USE1-201ENST00000263897 SPIN4Q56A73 249 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 ACSM2BQ68CK6 577 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 GALNT18Q6P9A2 607 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 SCIMPQ6UWF3 145 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 TICAM1Q8IUC6 712 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 EPS8L3Q8TE67 593 aaKnown RBP14.78□□□□□ -0.04
USE1-201ENST00000263897 SMC6Q96SB8 1091 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 BRINP2Q9C0B6 783 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 ANKZF1Q9H8Y5 726 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 SIRT5Q9NXA8 310 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 UTS2RQ9UKP6 389 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 BOKQ9UMX3 212 aaPredicted RBP14.78□□□□□ -0.04
USE1-201ENST00000263897 CFL2Q9Y281 166 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 LIPGQ9Y5X9 500 aa14.78□□□□□ -0.04
USE1-201ENST00000263897 PHF3Q92576 2039 aaKnown RBP14.78□□□□□ -0.04
USE1-201ENST00000263897 NCKAP5O14513 1909 aa14.77□□□□□ -0.04
USE1-201ENST00000263897 H3BQF6 201 aa14.77□□□□□ -0.05
USE1-201ENST00000263897 AQP7O14520 342 aa14.77□□□□□ -0.05
USE1-201ENST00000263897 COPEO14579 308 aa14.77□□□□□ -0.05
USE1-201ENST00000263897 BCKDKO14874 412 aa14.77□□□□□ -0.05
USE1-201ENST00000263897 PCDH7O60245 1069 aa14.77□□□□□ -0.05
USE1-201ENST00000263897 CDH16O75309 829 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms