RNA–Protein interactions for RNA: ENST00000261646.9

SREBF1-201, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SREBF1, Length 4,178 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-201ENST00000261646 C5AR2Q9P296 337 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 UPB1Q9UBR1 384 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF670-ZNF695F2Z2N8 137 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ARPC5O15511 151 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 NCR1O76036 304 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 GASTP01350 101 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ALDOBP05062 364 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ACPPP15309 386 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 MPIP34949 423 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 SLC19A1P41440 591 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PITPNBP48739 271 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 RGS1Q08116 209 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 FCN2Q15485 313 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 SWI5Q1ZZU3 235 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 CREB3L2Q70SY1 520 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PDZD9Q8IXQ8 264 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 RGMAQ96B86 450 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PPA2Q9H2U2 334 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 EXO5Q9H790 373 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 CSNK1G1Q9HCP0 422 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 TMPRSS11EQ9UL52 423 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 CACNG2Q9Y698 323 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PRSS21Q9Y6M0 314 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ERI3O43414 337 aaKnown RBP15.43■□□□□ 0.06
SREBF1-201ENST00000261646 SLC16A8O95907 504 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 SCG5P05408 212 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 EPHX1P07099 455 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 SLC14A2Q15849 920 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PRAMEF17Q5VTA0 474 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 NXNL2Q5VZ03 156 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 SBSNQ6UWP8 590 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 GDPD4Q6W3E5 623 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 BCDIN3DQ7Z5W3 292 aaKnown RBP15.43■□□□□ 0.06
SREBF1-201ENST00000261646 TEX26Q8N6G2 289 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ZSWIM3Q96MP5 696 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ZIC5Q96T25 663 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP15.43■□□□□ 0.063e-7■■■□□ 17.6
SREBF1-201ENST00000261646 SLC28A3Q9HAS3 691 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 THSD1Q9NS62 852 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 RREB1Q92766 1687 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 COCHO43405 550 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 SCO1O75880 301 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 EOMESO95936 686 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 P2RX3P56373 397 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 ELP2Q6IA86 826 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 B3GLCTQ6Y288 498 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PEG10Q86TG7 708 aaKnown RBP15.43■□□□□ 0.06
SREBF1-201ENST00000261646 OR2T33Q8NG76 320 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 OR5P2Q8WZ92 322 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PPP1R16AQ96I34 528 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 VNN3Q9NY84 501 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 OR6C2Q9NZP2 312 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 PLAGL1Q9UM63 463 aa15.43■□□□□ 0.06
SREBF1-201ENST00000261646 KIAA0100Q14667 2235 aaKnown RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 POM121CA8CG34 1229 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 EIF3FO00303 357 aaPredicted RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 POLR1CO15160 346 aaPredicted RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 AKR7A2O43488 359 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 CREBL2O60519 120 aaPredicted RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 TRIM3O75382 744 aaPredicted RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ITGA10O75578 1167 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 GPX5O75715 221 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 RCBTB2O95199 551 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF865P0CJ78 1059 aaPredicted RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 C1GALT1C1LP0DN25 315 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF3P17036 446 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 CD9P21926 228 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 PKLRP30613 574 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 GPR4P46093 362 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 MBTPS1Q14703 1052 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 NATD1Q8N6N6 113 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF676Q8N7Q3 588 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 INO80EQ8NBZ0 244 aaPredicted RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 TRMT10AQ8TBZ6 339 aaKnown RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 GRHL3Q8TE85 626 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ZNF566Q969W8 418 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 NT5DC2Q9H857 520 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 POLE3Q9NRF9 147 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 RLIMQ9NVW2 624 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 MUTYHQ9UIF7 546 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 GNG8Q9UK08 70 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 A0A1B0GVI7 797 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 C5orf51A6NDU8 294 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 SCAMP1O15126 338 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ARHGEF15O94989 841 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 TFP02787 698 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 MAGEA11P43364 429 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 NRIP1P48552 1158 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 IL20RBQ6UXL0 311 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 TANKQ92844 425 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 CHFRQ96EP1 664 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 TRPV4Q9HBA0 871 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 COPZ2Q9P299 210 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 KLHL21Q9UJP4 597 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ARID1AO14497 2285 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 POP7O75817 140 aaKnown RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 WDR5P61964 334 aaKnown RBP15.42■□□□□ 0.06
SREBF1-201ENST00000261646 HBA1P69905 142 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 KCNC3Q14003 757 aa15.42■□□□□ 0.06
SREBF1-201ENST00000261646 ARSIQ5FYB1 569 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms