RNA–Protein interactions for RNA: ENST00000260054.8

CCDC90B-201, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 1,688 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-201ENST00000260054 ZNF639Q9UID6 485 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 PCDHB14Q9Y5E9 798 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 SNX8Q9Y5X2 465 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 A0A096LPI6 279 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 IGHV1-45A0A0A0MS14 117 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 A0A1W2PQ72 361 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 FXYD1O00168 92 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 SEC24DO94855 1032 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 SLITRK5O94991 958 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 KCNH1O95259 989 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 DDAH2O95865 285 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 C1QCP02747 245 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 ESRRAP11474 423 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 COX6A1P12074 109 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 S1PR1P21453 382 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 SOAT1P35610 550 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 CORO7P57737 925 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 ZNF621Q6ZSS3 439 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 MRGPREQ86SM8 312 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 DHDDSQ86SQ9 333 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 MSRB3Q8IXL7 192 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 ZNF321PQ8N8H1 164 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 PCYOX1LQ8NBM8 494 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 OR5AK3PQ8NH89 298 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 OR14A16Q8NHC5 309 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 DAZLQ92904 295 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 NACC2Q96BF6 587 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 FAM120BQ96EK7 910 aaKnown RBP14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 SENP5Q96HI0 755 aaPredicted RBP14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 LPAR4Q99677 370 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 CNPPD1Q9BV87 410 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 ZNF700Q9H0M5 742 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 VAPAQ9P0L0 249 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 ERVK-19Q9WJR5 959 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 PCSK5Q92824 1860 aa14.74□□□□□ -0.05
CCDC90B-201ENST00000260054 TRBV5-3A0A0A0MS03 114 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 SAGE2PA6NJ88 616 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 UPK1AO00322 258 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 KLK10O43240 276 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 PLOD3O60568 738 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 ERN1O75460 977 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 ANP32DO95626 131 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 CBX7O95931 251 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 ZCCHC18P0CG32 403 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 CALB2P22676 271 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 SSTR4P31391 388 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 NUDT2P50583 147 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 FUT7Q11130 342 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 DUSP8Q13202 625 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 EXOSC7Q15024 291 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 TRMT5Q32P41 509 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 TMEM64Q6YI46 380 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 OR2L13Q8N349 312 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 NFAM1Q8NET5 270 aaPredicted RBP14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 FBXO27Q8NI29 283 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 SLC2A12Q8TD20 617 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 ZNF721Q8TF20 911 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 AURKBQ96GD4 344 aaPredicted RBP14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 FBXL20Q96IG2 436 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 PHF12Q96QT6 1004 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 SLC39A3Q9BRY0 314 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 OR8D2Q9GZM6 311 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 EFCAB1Q9HAE3 211 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 DDX18Q9NVP1 670 aaKnown RBP14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 VPS4AQ9UN37 437 aa14.73□□□□□ -0.05
CCDC90B-201ENST00000260054 A0A087WV62 115 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 RNF103-CHMP3A0A140T963 221 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 EBAG9O00559 213 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 CLPSP04118 112 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 IGKV3-11P04433 115 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 CCT3P49368 545 aaKnown RBP14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 GPR143P51810 404 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 BNIP1Q12981 228 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 CAPRIN1Q14444 709 aaKnown RBP14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 ATP1A1-AS1Q5TC04 95 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 C6orf163Q5TEZ5 329 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 ERMP1Q7Z2K6 904 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 RAB43Q86YS6 212 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 MORN4Q8NDC4 146 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 DNAJB8Q8NHS0 232 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 SLC35A5Q9BS91 424 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 DPH1Q9BZG8 443 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 ZCCHC3Q9NUD5 404 aaKnown RBP14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 P4HTMQ9NXG6 502 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 NTMQ9P121 344 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 PTGFRNQ9P2B2 879 aa14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 PPIEQ9UNP9 301 aaKnown RBP14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 C19orf53Q9UNZ5 99 aaPredicted RBP14.72□□□□□ -0.05
CCDC90B-201ENST00000260054 ACACAQ13085 2346 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 C1QTNF9BB2RNN3 333 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 MASP2O00187 686 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 EFSO43281 561 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 EMC8O43402 210 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 DYRK3O43781 588 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 NME6O75414 186 aaPredicted RBP14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 IFI6P09912 130 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 C1QTNF9P0C862 333 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 UQCRC2P22695 453 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 SLC26A5P58743 744 aa14.71□□□□□ -0.05
CCDC90B-201ENST00000260054 ATP1A4Q13733 1029 aa14.71□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms