RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 CLCN3P51790 818 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 TDGF1P3P51864 188 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 MYL7Q01449 175 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 EVX2Q03828 476 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CSHL1Q14406 222 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 NR6A1Q15406 480 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 FSCN1Q16658 493 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 DPY19L1Q2PZI1 675 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 C2orf76Q3KRA6 126 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 SV2CQ496J9 727 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 MED27Q6P2C8 311 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 TRAT1Q6PIZ9 186 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 KLHL17Q6TDP4 642 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 SERPINA13PQ6UXR4 307 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 IRF2BP2Q7Z5L9 587 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 PEG10Q86TG7 708 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 VASH2Q86V25 355 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 IFNEQ86WN2 208 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 FAM98AQ8NCA5 519 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 KIAA0895Q8NCT3 520 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 RDH11Q8TC12 318 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 SLC35F5Q8WV83 523 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CACNG8Q8WXS5 425 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 TM4SF18Q96CE8 201 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 RRNAD1Q96FB5 475 aaKnown RBP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 CMTM7Q96FZ5 175 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 ELOVL1Q9BW60 279 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 RNF122Q9H9V4 155 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 OSGEPQ9NPF4 335 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP7.37□□□□□ -1.23
GPNMB-201ENST00000258733 GNG8Q9UK08 70 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 FZD10Q9ULW2 581 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 LYVE1Q9Y5Y7 322 aa7.37□□□□□ -1.23
GPNMB-201ENST00000258733 RGPD2P0DJD1 1756 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SCN11AQ9UI33 1791 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM72A0PK05 275 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 GSG1L2A8MUP6 293 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 A8MWP6 167 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 D6RAR5 112 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 M0QYT0 321 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 M0R233 179 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SIAH2O43255 324 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 NTSR2O95665 410 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 CYBBP04839 570 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 F13BP05160 661 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 STAG3L2P0CL84 134 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 HAPLN1P10915 354 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 DAOP14920 347 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 CRHBPP24387 322 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 MC4RP32245 332 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 OAZ1P54368 228 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SORDQ00796 357 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SRSF5Q13243 272 aaKnown RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 TSTA3Q13630 321 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 INPP5JQ15735 1006 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 FAM26FQ5R3K3 315 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 OR8G2PQ6IF36 304 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ZNF790Q6PG37 636 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 TSSK4Q6SA08 328 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 LRRN1Q6UXK5 716 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 FAM83HQ6ZRV2 1179 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 MYPOPQ86VE0 399 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 RGL4Q8IZJ4 473 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 AMER2Q8N7J2 671 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 MFSD9Q8NBP5 474 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 OR2D3Q8NGH3 330 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ZSCAN18Q8TBC5 510 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 EDAQ92838 391 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 TMEM74Q96NL1 305 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 WFIKKN1Q96NZ8 548 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 TGM7Q96PF1 710 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ELF4Q99607 663 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SNHG12Q9BXW3 62 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 NXF2Q9GZY0 626 aaKnown RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ZFP64Q9NPA5 681 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 FZD3Q9NPG1 666 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PDGFCQ9NRA1 345 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PNO1Q9NRX1 252 aaKnown RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 CNTNAP4Q9C0A0 1308 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 A0A087X0T9 212 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 EDDM13A0A1B0GTR0 161 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF27A3QJZ7 478 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF25A6NGN4 478 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 MOXD2PA6NHM9 499 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 A6NIZ1 184 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF26H0Y7S4 382 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ACOT8O14734 319 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 MEIS2O14770 477 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PAPSS1O43252 624 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 XPNPEP2O43895 674 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF4O60810 478 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 PRAMEF11O60813 436 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 ZMPSTE24O75844 475 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 DDNO94850 711 aaPredicted RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 SRPRAP08240 638 aaKnown RBP7.36□□□□□ -1.23
GPNMB-201ENST00000258733 DHRS4L1P0CG22 281 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 KITP10721 976 aa7.36□□□□□ -1.23
GPNMB-201ENST00000258733 GZMHP20718 246 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms