RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PREBQ9HCU5 417 aa8.59□□□□□ -1.03
CKAP2-201ENST00000258607 ABCB9Q9NP78 766 aa8.59□□□□□ -1.03
CKAP2-201ENST00000258607 GIMAP4Q9NUV9 329 aa8.59□□□□□ -1.03
CKAP2-201ENST00000258607 GPR55Q9Y2T6 319 aaPredicted RBP8.59□□□□□ -1.03
CKAP2-201ENST00000258607 FANCMQ8IYD8 2048 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 C2orf72A6NCS6 295 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CLPXO76031 633 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CD36P16671 472 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 HIST1H1TP22492 207 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CRHBPP24387 322 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PEBP1P30086 187 aaKnown RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 TRPC1P48995 793 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CAV3P56539 151 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 KCNJ10P78508 379 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ODF4Q2M2E3 257 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF311Q5JNZ3 666 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 UBE3DQ7Z6J8 389 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 LHFPL3Q86UP9 236 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 OOSP2Q86WS3 158 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SIX5Q8N196 739 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 METTL4Q8N3J2 472 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 TP53I13Q8NBR0 393 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 NUP43Q8NFH3 380 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SGPP1Q9BX95 441 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 FAM192AQ9GZU8 254 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 AICDAQ9GZX7 198 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 POLR2J3Q9H1A7 115 aaKnown RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF696Q9H7X3 374 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 NAALAD2Q9Y3Q0 740 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PTPRSQ13332 1948 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SMIM31A0A1B0GVY4 71 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PEX12O00623 359 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SLC16A5O15375 505 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 HNRNPCP07910 306 aaKnown RBP eCLIP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ST6GAL1P15907 406 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 GRPRP30550 384 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 BSGP35613 385 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 LSSP48449 732 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 NAA20P61599 178 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SELENOWP63302 87 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PPP2R2BQ00005 443 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ST3GAL4Q11206 333 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 GRIK2Q13002 908 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 DCST1Q5T197 706 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 FAM71E1Q6IPT2 247 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 REEP3Q6NUK4 255 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF730Q6ZMV8 503 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SPRED1Q7Z699 444 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CCDC71Q8IV32 467 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 OR4N2Q8NGD1 307 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 MAP3K3Q99759 626 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 C1QTNF7Q9BXJ2 289 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SMOC1Q9H4F8 434 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 LHX9Q9NQ69 397 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CLEC2DQ9UHP7 191 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 MPDZO75970 2070 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 FAM170BA6NMN3 283 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 H0YGG7 62 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PRG2P13727 222 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 GPX2P18283 190 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 DDCP20711 480 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 MAOAP21397 527 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 FPR1P21462 350 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CXCR2P25025 360 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ARF3P61204 181 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SFSWAPQ12872 951 aaKnown RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ZNF267Q14586 743 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PUM1Q14671 1186 aaKnown RBP eCLIP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SNAPC1Q16533 368 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CRB2Q5IJ48 1285 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 FIGLAQ6QHK4 219 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 C16orf47Q6ZP98 133 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 NLRP8Q86W28 1048 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CCDC103Q8IW40 242 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CAMKK1Q8N5S9 505 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 OR8J2Q8NGG1 315 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 UBE2E3Q969T4 207 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 MMABQ96EY8 250 aaPredicted RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PTCHD1Q96NR3 888 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 SLC38A3Q99624 504 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 APOL4Q9BPW4 351 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 ALOXE3Q9BYJ1 711 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 OR51E2Q9H255 320 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 GORASP2Q9H8Y8 452 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 PNO1Q9NRX1 252 aaKnown RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 YARS2Q9Y2Z4 477 aaKnown RBP8.58□□□□□ -1.04
CKAP2-201ENST00000258607 OR10H1Q9Y4A9 318 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 CSNK1G3Q9Y6M4 447 aa8.58□□□□□ -1.04
CKAP2-201ENST00000258607 DYTNA2CJ06 578 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 PIP5K1CO60331 668 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 CCNB2O95067 398 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 KRT75O95678 551 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 SAGP10523 405 aaPredicted RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 IL9P15248 144 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 HNRNPA2B1P22626 353 aaKnown RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 HLCSP50747 726 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 STXBP1P61764 594 aaKnown RBP8.57□□□□□ -1.04
CKAP2-201ENST00000258607 BTG2P78543 158 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 STX4Q12846 297 aa8.57□□□□□ -1.04
CKAP2-201ENST00000258607 TMEM52Q8NDY8 209 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms