RNA–Protein interactions for RNA: ENST00000257604.9

TRAFD1-201, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene TRAFD1, Length 3,178 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-201ENST00000257604 BTBD2Q9BX70 525 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SLIRPQ9GZT3 109 aaKnown RBP13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 S1PR5Q9H228 398 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 C11orf16Q9NQ32 467 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 C1GALT1Q9NS00 363 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 ATP6V1HQ9UI12 483 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 SPAG17Q6Q759 2223 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 DMDP11532 3685 aa13.85□□□□□ -0.19
TRAFD1-201ENST00000257604 EFCAB9A8MZ26 197 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 B4DGG1 531 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 AP3D1O14617 1153 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 ALOX5P09917 674 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 AZGP1P25311 298 aaKnown RBP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 LSM11P83369 360 aaKnown RBP eCLIP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 PIN1Q13526 163 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 STEAP3Q658P3 488 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 BMFQ96LC9 184 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 PSD2Q9BQI7 771 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 BEX2Q9BXY8 128 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 OR51I1Q9H343 314 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 TP63Q9H3D4 680 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF624Q9P2J8 865 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 ANGPT4Q9Y264 503 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 NOX1Q9Y5S8 564 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 OR2W5A6NFC9 320 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 PRAMEF25A6NGN4 478 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 OR10H3O60404 316 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 GADD45GO95257 159 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 NTN1O95631 604 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 CTSEP14091 401 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 DUSP2Q05923 314 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 HTR4Q13639 388 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 BCL2A1Q16548 175 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 RSBN1Q5VWQ0 802 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 RNF165Q6ZSG1 346 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 FAM46DQ8NEK8 389 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 OR9A2Q8NGT5 310 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF717Q9BY31 904 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 AICDAQ9GZX7 198 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 DCSTAMPQ9H295 470 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 GLIPR2Q9H4G4 154 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF556Q9HAH1 456 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 IMPAD1Q9NX62 359 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 PCDHGA3Q9Y5H0 932 aa13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 DNMT3AQ9Y6K1 912 aaPredicted RBP13.84□□□□□ -0.19
TRAFD1-201ENST00000257604 A0A1W2PR48 441 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 TFECO14948 347 aaPredicted RBP13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 B4GALT2O60909 372 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 KCNK2O95069 426 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 PPIBP23284 216 aaKnown RBP13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 CMPK1P30085 196 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 PEBP1P30086 187 aaKnown RBP13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC35A2P78381 396 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 TOP3AQ13472 1001 aaPredicted RBP13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 TEAD4Q15561 434 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 DESI1Q6ICB0 168 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 AKAP14Q86UN6 197 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 SLC44A3Q8N4M1 653 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 OXR1Q8N573 874 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 METTL27Q8N6F8 245 aaPredicted RBP13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 ZNF614Q8N883 585 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 YIPF6Q96EC8 236 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 ZBED6CLQ96FA7 236 aaPredicted RBP13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 FCRL1Q96LA6 429 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 Q96MT0 163 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 MAPKAP1Q9BPZ7 522 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 KCNS3Q9BQ31 491 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 MENTQ9BUN1 341 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 PRRG3Q9BZD7 231 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 TPK1Q9H3S4 243 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 SCN3BQ9NY72 215 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 COLEC10Q9Y6Z7 277 aa13.83□□□□□ -0.19
TRAFD1-201ENST00000257604 UNC13CQ8NB66 2214 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 ZNF888P0CJ79 500 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 MC3RP41968 323 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 RACK1P63244 317 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 RHOXF1Q8NHV9 184 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 TOE1Q96GM8 510 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 WDR92Q96MX6 357 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 CHCHD6Q9BRQ6 235 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 LMAN2LQ9H0V9 348 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 MAGIXQ9H6Y5 334 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 ACOT13Q9NPJ3 140 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 CORO2BQ9UQ03 480 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 ENTPD4Q9Y227 616 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 KCNE3Q9Y6H6 103 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 ALPK2Q86TB3 2170 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 RGS10O43665 173 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 TNFRSF21O75509 655 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 CCDC159P0C7I6 412 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 TNNI3P19429 210 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 KRT20P35900 424 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 LIPAP38571 399 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 EIF2DP41214 584 aaKnown RBP13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 VASPP50552 380 aaPredicted RBP13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 NPRL3Q12980 569 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 C6orf132Q5T0Z8 1188 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 PRSS41Q7RTY9 318 aa13.83□□□□□ -0.2
TRAFD1-201ENST00000257604 LYSMD2Q8IV50 215 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms