RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 MATN1P21941 496 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 CD1CP29017 333 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 VLDLRP98155 873 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 LASP1Q14847 261 aaKnown RBP17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ANKRD34AQ69YU3 496 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 LRRC25Q8N386 305 aaPredicted RBP17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ELP4Q96EB1 424 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 SMURF2Q9HAU4 748 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 HCN3Q9P1Z3 774 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 DNAJB9Q9UBS3 223 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ADAMTS20P59510 1910 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ALPLP05186 524 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 HMGN2P05204 90 aaKnown RBP17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ALDH3A2P51648 485 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 DAG1Q14118 895 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 MAPK11Q15759 364 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 USP51Q70EK9 711 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 OLIG3Q7RTU3 272 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 SIMC1Q8NDZ2 872 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 TMEM19Q96HH6 336 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ZC3H10Q96K80 434 aaKnown RBP17.75■□□□□ 0.43
TRIM47-201ENST00000254816 MUS81Q96NY9 551 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 EQTNQ9NQ60 294 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ADPRHL2Q9NX46 363 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ZSCAN32Q9NX65 697 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 ANGPT4Q9Y264 503 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 SPACA6W5XKT8 324 aa17.75■□□□□ 0.43
TRIM47-201ENST00000254816 HYKKA2RU49 373 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 PRAMEF27A3QJZ7 478 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 CHST10O43529 356 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 MAT1AQ00266 395 aaKnown RBP17.74■□□□□ 0.43
TRIM47-201ENST00000254816 SYT16Q17RD7 645 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 TMEM64Q6YI46 380 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 TMEM179BQ7Z7N9 219 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 TTC29Q8NA56 475 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-201ENST00000254816 SMYD1Q8NB12 490 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 NUP43Q8NFH3 380 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 XAGE5Q8WWM1 108 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 NUDT22Q9BRQ3 303 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 RAB23Q9ULC3 237 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 U3KQV3 271 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 CPED1A4D0V7 1026 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 C5orf58C9J3I9 102 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 SIGLEC6O43699 453 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 TRMUO75648 421 aaKnown RBP17.74■□□□□ 0.43
TRIM47-201ENST00000254816 TFPTP0C1Z6 253 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 ELK4P28324 431 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 MAGEA2P43356 314 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 GPR3P46089 330 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 PCBP3P57721 371 aaKnown RBP17.74■□□□□ 0.43
TRIM47-201ENST00000254816 SELENOWP63302 87 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 KCNJ10P78508 379 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 SYPL1Q16563 259 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 GUSBP11Q6P575 273 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 CCDC80Q76M96 950 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 WDR53Q7Z5U6 358 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-201ENST00000254816 GPR141Q7Z602 305 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 PLXDC1Q8IUK5 500 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 OR7G2Q8NG99 324 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 SFXN5Q8TD22 340 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 ZNF285Q96NJ3 590 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 CD180Q99467 661 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 A4GALTQ9NPC4 353 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 IL1RAPQ9NPH3 570 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 VNN3Q9NY84 501 aa17.74■□□□□ 0.43
TRIM47-201ENST00000254816 HEMK1Q9Y5R4 338 aaPredicted RBP17.74■□□□□ 0.43
TRIM47-201ENST00000254816 LY6G6EA0A0G2JKS1 128 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 TRIM64CA6NLI5 447 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 G3V2T6 193 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 EMC8O43402 210 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 FABP3P05413 133 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 FHP07954 510 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 THRBP10828 461 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 CPMP14384 443 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 SH3BGRP55822 239 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-201ENST00000254816 RAB38P57729 211 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 MYBPC3Q14896 1274 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 NR1D2Q14995 579 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 PERM1Q5SV97 790 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 PEAR1Q5VY43 1037 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-201ENST00000254816 REEP3Q6NUK4 255 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 FAM111BQ6SJ93 734 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 ZDHHC13Q8IUH4 622 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 CLVS1Q8IUQ0 354 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-201ENST00000254816 DOHHQ9BU89 302 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 NPLQ9BXD5 320 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-201ENST00000254816 OCEL1Q9H607 264 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 TUBA8Q9NY65 449 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-201ENST00000254816 FBXO4Q9UKT5 387 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 ATXN7L1Q9ULK2 861 aaPredicted RBP17.73■□□□□ 0.43
TRIM47-201ENST00000254816 U3KQA8 63 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 TRIM64A6NGJ6 449 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 AGRPO00253 132 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 OR1E2P47887 323 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 ARL4DP49703 201 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 GPLD1P80108 840 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 ERV3-1Q14264 604 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 EID2Q8N6I1 236 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 OR4C6Q8NH72 309 aa17.73■□□□□ 0.43
TRIM47-201ENST00000254816 PEX11GQ96HA9 241 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms