RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 SCD5Q86SK9 330 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 PTERQ96BW5 349 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 LRIG1Q96JA1 1093 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 SCGB3A2Q96PL1 93 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 FRS3O43559 492 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 EEDO75530 441 aaKnown RBP17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 RGS19P49795 217 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 SMAD2Q15796 467 aaKnown RBP17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 ISCA2Q86U28 154 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 GGT2P36268 569 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 CHRFAM7AQ494W8 412 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 PLBD1Q6P4A8 553 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 DNAAF1Q8NEP3 725 aa17.81■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF487B1APH4 448 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 IL4RP24394 825 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 SFTPDP35247 375 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 ARSKQ6UWY0 536 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 GID4Q8IVV7 300 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 RANBP9Q96S59 729 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 C5AR1P21730 350 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 TAS2R38P59533 333 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 TAS2R43P59537 309 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 CDKL4Q5MAI5 379 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 LETMD1Q6P1Q0 360 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 BLOC1S3Q6QNY0 202 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 C3orf58Q8NDZ4 430 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 RLN3Q8WXF3 142 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 CPEB1Q9BZB8 566 aaKnown RBP17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 H3BML4 177 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 FASLGP48023 281 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 TMEM69Q5SWH9 247 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 ATAD3CQ5T2N8 411 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 UBE2UQ5VVX9 321 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 LEG1Q6P5S2 330 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 KCNK13Q9HB14 408 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 MYH6P13533 1939 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 LRRN3E7EW58 273 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 I3L521 148 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 FANCGO15287 622 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 SOX9P48436 509 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 SGTBQ96EQ0 304 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 OR51B6Q9H340 312 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 LRRN3Q9H3W5 708 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 ERVK13-1Q9NX77 482 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 PCTPQ9UKL6 214 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 MYH7P12883 1935 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 CTBP2P56545 445 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 TUBA1BP68363 451 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 TUBA4AP68366 448 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 MOGSQ13724 837 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 CDNFQ49AH0 187 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 C6orf141Q5SZD1 244 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 GLT8D1Q68CQ7 371 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 TUBA1AQ71U36 451 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 GRPEL2Q8TAA5 225 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 FIBINQ8TAL6 211 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 TCEAL4Q96EI5 215 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 CWH43Q9H720 699 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 RARRES3Q9UL19 164 aa17.8■□□□□ 0.44
SMARCC1-201ENST00000254480 E7ESA3 106 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SSX5O60225 188 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 EDN1P05305 212 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 DUSP3P51452 185 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 KANK2Q63ZY3 851 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 PSD4Q8NDX1 1056 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 COQ8AQ8NI60 647 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 NETO1Q8TDF5 533 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 FEVQ99581 238 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 ANKMY1Q9P2S6 941 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 RASAL1O95294 804 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 ZNF888P0CJ79 500 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 RPS3P23396 243 aaKnown RBP eCLIP17.79■□□□□ 0.443e-6■□□□□ 10.1
SMARCC1-201ENST00000254480 CFL1P23528 166 aaKnown RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 ITGB8P26012 769 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 HTR1EP28566 365 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 RAB28P51157 221 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 MAB21L1Q13394 359 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 APOFQ13790 326 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 C6orf132Q5T0Z8 1188 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 NPRL2Q8WTW4 380 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SLC45A3Q96JT2 553 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 CCM2LQ9NUG4 571 aaPredicted RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 WASF3Q9UPY6 502 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 BACE2Q9Y5Z0 518 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 A0A1B0GV50 99 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 M0R3H8 397 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 CRISP1P54107 249 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SELENOVP59797 346 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 RBM39Q14498 530 aaKnown RBP17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 UGT3A2Q3SY77 523 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 CCDC58Q4VC31 144 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 ALG10BQ5I7T1 473 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 EEF1A1P5Q5VTE0 462 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 NAGSQ8N159 534 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 C7orf34Q96L11 122 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 RXFP3Q9NSD7 469 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 IGSF5Q9NSI5 407 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SPEF2Q9C093 1822 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 M0R129 80 aa17.79■□□□□ 0.44
SMARCC1-201ENST00000254480 SQSTM1Q13501 440 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms