RNA–Protein interactions for RNA: ENST00000246117.8

NCLN-201, Transcript of nicalin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCLN, Length 4,005 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCLN-201ENST00000246117 CDH24Q86UP0 819 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 OR6Q1Q8NGQ2 317 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 C9orf43Q8TAL5 461 aaPredicted RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 NARS2Q96I59 477 aaKnown RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 SPNS1Q9H2V7 528 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 B4DGG1 531 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 NCR1O76036 304 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 KAT7O95251 611 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 CLEC2LP0C7M8 214 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 PIK3CBP42338 1070 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 DCDC1P59894 354 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 STXBP1P61764 594 aaKnown RBP13.01□□□□□ -0.33
NCLN-201ENST00000246117 ABATP80404 500 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 FBXO43Q4G163 708 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 STEAP3Q658P3 488 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 SLC30A8Q8IWU4 369 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 PLA2G15Q8NCC3 412 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 SLC38A5Q8WUX1 472 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 OR5P2Q8WZ92 322 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 NKD1Q969G9 470 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 CRELD1Q96HD1 420 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 TMEM246Q9BRR3 403 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 ING3Q9NXR8 418 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 POLR1DQ9Y2S0 133 aa13.01□□□□□ -0.33
NCLN-201ENST00000246117 PRSS23O95084 383 aa13□□□□□ -0.33
NCLN-201ENST00000246117 VNN2O95498 520 aa13□□□□□ -0.33
NCLN-201ENST00000246117 GSTT2P0CG29 244 aa13□□□□□ -0.33
NCLN-201ENST00000246117 GSTT2BP0CG30 244 aa13□□□□□ -0.33
NCLN-201ENST00000246117 PVRP15151 417 aa13□□□□□ -0.33
NCLN-201ENST00000246117 GNSP15586 552 aa13□□□□□ -0.33
NCLN-201ENST00000246117 PYCR1P32322 319 aa13□□□□□ -0.33
NCLN-201ENST00000246117 CTBSQ01459 385 aa13□□□□□ -0.33
NCLN-201ENST00000246117 KLHL22Q53GT1 634 aa13□□□□□ -0.33
NCLN-201ENST00000246117 FAAH2Q6GMR7 532 aa13□□□□□ -0.33
NCLN-201ENST00000246117 PLBD1Q6P4A8 553 aa13□□□□□ -0.33
NCLN-201ENST00000246117 IL20RBQ6UXL0 311 aa13□□□□□ -0.33
NCLN-201ENST00000246117 Q6ZNX1 250 aa13□□□□□ -0.33
NCLN-201ENST00000246117 SLCO4C1Q6ZQN7 724 aa13□□□□□ -0.33
NCLN-201ENST00000246117 DGLUCYQ7Z3D6 616 aa13□□□□□ -0.33
NCLN-201ENST00000246117 RIMKLAQ8IXN7 391 aa13□□□□□ -0.33
NCLN-201ENST00000246117 SAMD12Q8N8I0 201 aa13□□□□□ -0.33
NCLN-201ENST00000246117 SRFBP1Q8NEF9 429 aaKnown RBP13□□□□□ -0.33
NCLN-201ENST00000246117 OR4F15Q8NGB8 312 aa13□□□□□ -0.33
NCLN-201ENST00000246117 OR8J1Q8NGP2 316 aa13□□□□□ -0.33
NCLN-201ENST00000246117 CSF3RQ99062 836 aa13□□□□□ -0.33
NCLN-201ENST00000246117 COLEC10Q9Y6Z7 277 aa13□□□□□ -0.33
NCLN-201ENST00000246117 BLOC1S5-TXNDC5H3BN57 136 aa13□□□□□ -0.33
NCLN-201ENST00000246117 KHNYNO15037 678 aaKnown RBP13□□□□□ -0.33
NCLN-201ENST00000246117 PARP16Q8N5Y8 322 aa13□□□□□ -0.33
NCLN-201ENST00000246117 RFKQ969G6 155 aa13□□□□□ -0.33
NCLN-201ENST00000246117 ITFG2Q969R8 447 aa13□□□□□ -0.33
NCLN-201ENST00000246117 AHCYL2Q96HN2 611 aaKnown RBP13□□□□□ -0.33
NCLN-201ENST00000246117 BHLHE41Q9C0J9 482 aaPredicted RBP13□□□□□ -0.33
NCLN-201ENST00000246117 CLEC4MQ9H2X3 399 aaPredicted RBP13□□□□□ -0.33
NCLN-201ENST00000246117 CWH43Q9H720 699 aa13□□□□□ -0.33
NCLN-201ENST00000246117 USP36Q9P275 1121 aaKnown RBP13□□□□□ -0.33
NCLN-201ENST00000246117 YARS2Q9Y2Z4 477 aaKnown RBP13□□□□□ -0.33
NCLN-201ENST00000246117 WNK3Q9BYP7 1800 aa13□□□□□ -0.33
NCLN-201ENST00000246117 NDUFB5O43674 189 aa13□□□□□ -0.33
NCLN-201ENST00000246117 JRKO75564 520 aa13□□□□□ -0.33
NCLN-201ENST00000246117 OXSR1O95747 527 aaPredicted RBP13□□□□□ -0.33
NCLN-201ENST00000246117 NPPBP16860 134 aa13□□□□□ -0.33
NCLN-201ENST00000246117 NRARPQ7Z6K4 114 aa13□□□□□ -0.33
NCLN-201ENST00000246117 CADM3Q8N126 398 aa13□□□□□ -0.33
NCLN-201ENST00000246117 SAMD11Q96NU1 681 aa13□□□□□ -0.33
NCLN-201ENST00000246117 TREX2Q9BQ50 279 aaPredicted RBP13□□□□□ -0.33
NCLN-201ENST00000246117 TP63Q9H3D4 680 aaPredicted RBP13□□□□□ -0.33
NCLN-201ENST00000246117 SLC35C2Q9NQQ7 365 aa13□□□□□ -0.33
NCLN-201ENST00000246117 SLC16A5O15375 505 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 ABLIM3O94929 683 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 CDK1P06493 297 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 SDHBP21912 280 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 DDX6P26196 483 aaKnown RBP eCLIP12.99□□□□□ -0.332e-8■■■■■ 29
NCLN-201ENST00000246117 CST5P28325 142 aaPredicted RBP12.99□□□□□ -0.33
NCLN-201ENST00000246117 ACADLP28330 430 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 TM4SF4P48230 202 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 VEZF1Q14119 521 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 AMZ1Q400G9 498 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 VRK2Q86Y07 508 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 DNAJC22Q8N4W6 341 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 NXPE3Q969Y0 559 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 NELL2Q99435 816 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 MED28Q9H204 178 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 MGAT4BQ9UQ53 548 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 DLGAP1O14490 977 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 ARHGAP33O14559 1287 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 KMOO15229 486 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 LDB3O75112 727 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 CSN2P05814 226 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 CD22P20273 847 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 PCGF2P35227 344 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 AHRP35869 848 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 ST3GAL3Q11203 375 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 KCNC3Q14003 757 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 PRRT3Q5FWE3 981 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 PRSS36Q5K4E3 855 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 OR5M3Q8NGP4 307 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 OR4K3Q96R72 315 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 C11orf49Q9H6J7 331 aa12.99□□□□□ -0.33
NCLN-201ENST00000246117 COQ3Q9NZJ6 369 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms