RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 TMEM71Q6P5X7 295 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 VN1R4Q7Z5H5 301 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 B3GNT8Q7Z7M8 397 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 CROCCP3Q8IVE0 287 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 VPS37AQ8NEZ2 397 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ZNF566Q969W8 418 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 C7orf34Q96L11 122 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 OR2A5Q96R48 311 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ZFYVE21Q9BQ24 234 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 CCDC90BQ9GZT6 254 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 RAB33BQ9H082 229 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 GPN2Q9H9Y4 310 aaPredicted RBP15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 GALNT8Q9NY28 637 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 WARS2Q9UGM6 360 aaKnown RBP15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 PSME2Q9UL46 239 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 IGHV5-10-1A0A0J9YXX1 117 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 TMEM229AB2RXF0 380 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 RTCAO00442 366 aaKnown RBP15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 P2RX6O15547 441 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ANGPTL1O95841 491 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ABCB1P08183 1280 aaPredicted RBP15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 INHBBP09529 407 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 EPHA2P29317 976 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 AQP1P29972 269 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ARL4DP49703 201 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 GP2P55259 537 aaKnown RBP15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 PHF19Q5T6S3 580 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 PIWIL3Q7Z3Z3 882 aaKnown RBP15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ZBTB46Q86UZ6 589 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 KCT2Q8NC54 265 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 OR4A15Q8NGL6 344 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 CREB3L4Q8TEY5 395 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 UBE2E3Q969T4 207 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 FUNDC2Q9BWH2 189 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ASPSCR1Q9BZE9 553 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 AICDAQ9GZX7 198 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 SIRT5Q9NXA8 310 aa15.99■□□□□ 0.15
CDKN1A-201ENST00000244741 ASPMQ8IZT6 3477 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 MN1Q10571 1320 aaPredicted RBP15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 H0YGG7 62 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 GCM2O75603 506 aaPredicted RBP15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 ITIH1P19827 911 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 ITGA1P56199 1179 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 ARF3P61204 181 aaPredicted RBP15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 RPS15AP62244 130 aaKnown RBP15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 KCNJ10P78508 379 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 KEAP1Q14145 624 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 GALNT18Q6P9A2 607 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 TTC29Q8NA56 475 aaPredicted RBP15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 MFSD9Q8NBP5 474 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 SETD9Q8NE22 299 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 CCDC74BQ96LY2 380 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 SPATA9Q9BWV2 254 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 RHBGQ9H310 441 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 ERVK-18Q9QC07 812 aa15.98■□□□□ 0.15
CDKN1A-201ENST00000244741 M0QX08 132 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 JRKO75564 520 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 ZBTB11O95625 1053 aaPredicted RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 NR4A1P22736 598 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 CASP9P55211 416 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 MC1RQ01726 317 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 EMX1Q04741 257 aaPredicted RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 GPR19Q15760 415 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 SLC16A12Q6ZSM3 486 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 COMMD6Q7Z4G1 85 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 WDR48Q8TAF3 677 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.97■□□□□ 0.152e-8■■■■■ 30.4
CDKN1A-201ENST00000244741 FNDC8Q8TC99 324 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 TCTN2Q96GX1 697 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 REEP1Q9H902 201 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 GPATCH2Q9NW75 528 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 IRAK4Q9NWZ3 460 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 THUMPD1Q9NXG2 353 aaKnown RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 ATP6V1HQ9UI12 483 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 GMPPBQ9Y5P6 360 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 GMEB1Q9Y692 573 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 AP1M2Q9Y6Q5 423 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 SH3PXD2BA1X283 911 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 C4orf51C9J302 202 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 D6RAR5 112 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 RNASET2O00584 256 aaKnown RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 KLHL18O94889 574 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 BCL10O95999 233 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 PPIBP23284 216 aaKnown RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 AQP6Q13520 282 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 COX20Q5RI15 118 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 MCATQ8IVS2 390 aaKnown RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 TBC1D19Q8N5T2 526 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 ATG16L2Q8NAA4 619 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 ZCCHC10Q8TBK6 192 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 FAR1Q8WVX9 515 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 RERGQ96A58 199 aaPredicted RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 REEP4Q9H6H4 257 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 PDE7BQ9NP56 450 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 NDRG4Q9ULP0 352 aaKnown RBP15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 MAPRE3Q9UPY8 281 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 KLK4Q9Y5K2 254 aa15.97■□□□□ 0.15
CDKN1A-201ENST00000244741 MAGEB3O15480 346 aa15.96■□□□□ 0.15
CDKN1A-201ENST00000244741 SUV39H1O43463 412 aa15.96■□□□□ 0.15
CDKN1A-201ENST00000244741 FOLR1P15328 257 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms