RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 LCATP04180 440 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 ADRB3P13945 408 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 ARL2P36404 184 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 UGT2B10P36537 528 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 STK19P49842 368 aaPredicted RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 HTD2P86397 168 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 FXNQ16595 210 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 FBXL22Q6P050 247 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 MEX3BQ6ZN04 569 aaKnown RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 LRRC55Q6ZSA7 311 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 ZNF695Q8IW36 515 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 HSD17B14Q9BPX1 270 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 GATA5Q9BWX5 397 aaPredicted RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 NFE2L1Q14494 772 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 MELKQ14680 651 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 KCTD18Q6PI47 426 aaPredicted RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 NPAS3Q8IXF0 933 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 LRRC18Q8N456 261 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 MCHR1Q99705 422 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 TPPP3Q9BW30 176 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 PLEKHJ1Q9NW61 149 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 GLSO94925 669 aaPredicted RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 ZNF43P17038 809 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 OXTRP30559 389 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 CAMLGP49069 296 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 RPS26P62854 115 aaKnown RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 CNPY1Q3B7I2 92 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 C6orf120Q7Z4R8 191 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 CSNK1A1LQ8N752 337 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.64□□□□□ -0.394e-6■■■□□ 16
NEK9-201ENST00000238616 KAZALD1Q96I82 304 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 COG8Q96MW5 612 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 CD244Q9BZW8 370 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 TTYH3Q9C0H2 523 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 KLHL9Q9P2J3 617 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 SCML2Q9UQR0 700 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 HS3ST4Q9Y661 456 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 EIF4EP06730 217 aaKnown RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 PRDX6P30041 224 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 FBXO43Q4G163 708 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 AKR1C8PQ5T2L2 129 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 SFRP5Q5T4F7 317 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 AGTRAPQ6RW13 159 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 FAM234AQ9H0X4 552 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 PIGVQ9NUD9 493 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 RIMBP3CA6NJZ7 1639 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 RIMBP3BA6NNM3 1639 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 RIMBP3Q9UFD9 1639 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 RPS3P23396 243 aaKnown RBP eCLIP12.64□□□□□ -0.39
NEK9-201ENST00000238616 SHMT2P34897 504 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 CPOXP36551 454 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 ASPAP45381 313 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 RNF4P78317 190 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 MOGSQ13724 837 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 DLK2Q6UY11 383 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 FAM83HQ6ZRV2 1179 aaPredicted RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 MRPL21Q7Z2W9 205 aaKnown RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 ASPGQ86U10 573 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 LHFPL3Q86UP9 236 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 TPRA1Q86W33 373 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 SLC2A6Q9UGQ3 507 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 MAB21L2Q9Y586 359 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 GABRR1P24046 479 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 SOX3P41225 446 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 GALNT1Q10472 559 aaPredicted RBP12.64□□□□□ -0.39
NEK9-201ENST00000238616 ZNF805Q5CZA5 627 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 LRFN5Q96NI6 719 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 SYT4Q9H2B2 425 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 OXSMQ9NWU1 459 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 FNIP2Q9P278 1114 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 KLHL42Q9P2K6 505 aa12.64□□□□□ -0.39
NEK9-201ENST00000238616 RHOP08100 348 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 NR4A2P43354 598 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 ZNF674Q2M3X9 581 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 PXKQ7Z7A4 578 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 LINC00471Q8N535 108 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 HTR3BO95264 441 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 OR8U9P0C7N5 309 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 RGS6P49758 472 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 PRKXP51817 358 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 PTCHD3Q3KNS1 767 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 KRTCAP2Q8N6L1 136 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 PTERQ96BW5 349 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 DYNLRB1Q9NP97 96 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 CNOT11Q9UKZ1 510 aaKnown RBP12.63□□□□□ -0.39
NEK9-201ENST00000238616 ST14Q9Y5Y6 855 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 A0A0G2JLL6 359 aaPredicted RBP12.63□□□□□ -0.39
NEK9-201ENST00000238616 CYB5BO43169 146 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 PTH2RP49190 550 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 C22orf42Q6IC83 251 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 PRRT2Q7Z6L0 340 aaPredicted RBP12.63□□□□□ -0.39
NEK9-201ENST00000238616 PDSS2Q86YH6 399 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 OR4N5Q8IXE1 308 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 NATD1Q8N6N6 113 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 TXNDC5Q8NBS9 432 aaKnown RBP12.63□□□□□ -0.39
NEK9-201ENST00000238616 PSD4Q8NDX1 1056 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 CANT1Q8WVQ1 401 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 MSI2Q96DH6 328 aaKnown RBP12.63□□□□□ -0.39
NEK9-201ENST00000238616 C7orf26Q96N11 449 aa12.63□□□□□ -0.39
NEK9-201ENST00000238616 SUCNR1Q9BXA5 334 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms